RNA–Protein interactions for RNA: ENST00000550590.5

PMEL-216, Transcript of premelanosome protein, humanhuman

TSL 2

Gene PMEL, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-216ENST00000550590 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
PMEL-216ENST00000550590 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
PMEL-216ENST00000550590 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
PMEL-216ENST00000550590 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
PMEL-216ENST00000550590 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
PMEL-216ENST00000550590 FOXD1Q16676 465 aa15.37■□□□□ 0.05
PMEL-216ENST00000550590 MSH5O43196 834 aa14.76□□□□□ -0.05
PMEL-216ENST00000550590 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
PMEL-216ENST00000550590 PPP6R1Q9UPN7 881 aa13.73□□□□□ -0.21
PMEL-216ENST00000550590 ADRA2BP18089 450 aa13.65□□□□□ -0.22
PMEL-216ENST00000550590 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
PMEL-216ENST00000550590 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
PMEL-216ENST00000550590 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
PMEL-216ENST00000550590 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
PMEL-216ENST00000550590 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
PMEL-216ENST00000550590 RNF39Q9H2S5 420 aa12.5□□□□□ -0.41
PMEL-216ENST00000550590 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
PMEL-216ENST00000550590 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
PMEL-216ENST00000550590 POTEHQ6S545 545 aa12.2□□□□□ -0.46
PMEL-216ENST00000550590 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
PMEL-216ENST00000550590 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
PMEL-216ENST00000550590 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
PMEL-216ENST00000550590 PPP4R3CPQ6ZMV5 832 aa11.7□□□□□ -0.54
PMEL-216ENST00000550590 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
PMEL-216ENST00000550590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
PMEL-216ENST00000550590 DSG3P32926 999 aa11.42□□□□□ -0.58
PMEL-216ENST00000550590 CAPN15O75808 1086 aa11.3□□□□□ -0.6
PMEL-216ENST00000550590 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
PMEL-216ENST00000550590 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
PMEL-216ENST00000550590 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
PMEL-216ENST00000550590 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
PMEL-216ENST00000550590 CHRDL2Q6WN34 429 aa11.02□□□□□ -0.65
PMEL-216ENST00000550590 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
PMEL-216ENST00000550590 ABCB7O75027 752 aa10.94□□□□□ -0.66
PMEL-216ENST00000550590 TRHP20396 242 aaPredicted RBP10.91□□□□□ -0.66
PMEL-216ENST00000550590 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
PMEL-216ENST00000550590 APLP2Q06481 763 aa10.86□□□□□ -0.67
PMEL-216ENST00000550590 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
PMEL-216ENST00000550590 PELP1Q8IZL8 1130 aaKnown RBP10.83□□□□□ -0.68
PMEL-216ENST00000550590 MYT1Q01538 1121 aa10.67□□□□□ -0.7
PMEL-216ENST00000550590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.65□□□□□ -0.7
PMEL-216ENST00000550590 HNRNPUL2Q1KMD3 747 aaKnown RBP10.65□□□□□ -0.7
PMEL-216ENST00000550590 HAX1O00165 279 aa10.62□□□□□ -0.71
PMEL-216ENST00000550590 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
PMEL-216ENST00000550590 SLC4A2P04920 1241 aa10.55□□□□□ -0.72
PMEL-216ENST00000550590 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
PMEL-216ENST00000550590 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
PMEL-216ENST00000550590 POLA2Q14181 598 aa10.44□□□□□ -0.74
PMEL-216ENST00000550590 REM2Q8IYK8 340 aaPredicted RBP10.41□□□□□ -0.74
PMEL-216ENST00000550590 PLSCR2Q9NRY7 297 aa10.39□□□□□ -0.75
PMEL-216ENST00000550590 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
PMEL-216ENST00000550590 EVX2Q03828 476 aa10.36□□□□□ -0.75
PMEL-216ENST00000550590 LHX8Q68G74 356 aa10.36□□□□□ -0.75
PMEL-216ENST00000550590 PITPNM1O00562 1244 aa10.29□□□□□ -0.76
PMEL-216ENST00000550590 HRCP23327 699 aa10.24□□□□□ -0.77
PMEL-216ENST00000550590 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
PMEL-216ENST00000550590 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
PMEL-216ENST00000550590 NISCHQ9Y2I1 1504 aa10.17□□□□□ -0.78
PMEL-216ENST00000550590 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
PMEL-216ENST00000550590 GABBR2O75899 941 aa10.12□□□□□ -0.79
PMEL-216ENST00000550590 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
PMEL-216ENST00000550590 MYCNP04198 464 aaPredicted RBP10.07□□□□□ -0.8
PMEL-216ENST00000550590 PRKAR2AP13861 404 aaKnown RBP10.03□□□□□ -0.8
PMEL-216ENST00000550590 KCNA4P22459 653 aa9.89□□□□□ -0.83
PMEL-216ENST00000550590 POTEIP0CG38 1075 aa9.87□□□□□ -0.83
PMEL-216ENST00000550590 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
PMEL-216ENST00000550590 CLEC11AQ9Y240 323 aa9.84□□□□□ -0.83
PMEL-216ENST00000550590 ATF5Q9Y2D1 282 aaPredicted RBP9.84□□□□□ -0.83
PMEL-216ENST00000550590 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
PMEL-216ENST00000550590 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
PMEL-216ENST00000550590 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
PMEL-216ENST00000550590 POTEMA6NI47 508 aa9.79□□□□□ -0.84
PMEL-216ENST00000550590 CLCN6P51797 869 aa9.76□□□□□ -0.85
PMEL-216ENST00000550590 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
PMEL-216ENST00000550590 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
PMEL-216ENST00000550590 CHADLQ6NUI6 762 aa9.71□□□□□ -0.86
PMEL-216ENST00000550590 DCBLD2Q96PD2 775 aa9.71□□□□□ -0.86
PMEL-216ENST00000550590 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
PMEL-216ENST00000550590 OTUD5Q96G74 571 aa9.69□□□□□ -0.86
PMEL-216ENST00000550590 CD44P16070 742 aaKnown RBP9.67□□□□□ -0.86
PMEL-216ENST00000550590 DCAF1Q9Y4B6 1507 aa9.63□□□□□ -0.87
PMEL-216ENST00000550590 PPARGC1BQ86YN6 1023 aaKnown RBP9.63□□□□□ -0.87
PMEL-216ENST00000550590 FBLN2P98095 1184 aa9.6□□□□□ -0.87
PMEL-216ENST00000550590 PRR29P0C7W0 189 aa9.58□□□□□ -0.88
PMEL-216ENST00000550590 PCGF6Q9BYE7 350 aa9.58□□□□□ -0.88
PMEL-216ENST00000550590 SSUH2Q9Y2M2 353 aa9.56□□□□□ -0.88
PMEL-216ENST00000550590 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
PMEL-216ENST00000550590 CCDC180Q9P1Z9 1646 aa9.55□□□□□ -0.88
PMEL-216ENST00000550590 ACIN1Q9UKV3 1341 aaKnown RBP9.54□□□□□ -0.88
PMEL-216ENST00000550590 POTEB2H3BUK9 544 aa9.53□□□□□ -0.88
PMEL-216ENST00000550590 ERICH6Q7L0X2 663 aa9.53□□□□□ -0.88
PMEL-216ENST00000550590 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
PMEL-216ENST00000550590 FARP1Q9Y4F1 1045 aaPredicted RBP9.52□□□□□ -0.89
PMEL-216ENST00000550590 CENPBP07199 599 aaPredicted RBP9.51□□□□□ -0.89
PMEL-216ENST00000550590 ZNF579Q8NAF0 562 aaKnown RBP9.48□□□□□ -0.89
PMEL-216ENST00000550590 MYO15BQ96JP2 1530 aa9.45□□□□□ -0.9
PMEL-216ENST00000550590 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
PMEL-216ENST00000550590 TRIM26Q12899 539 aaPredicted RBP9.43□□□□□ -0.9
PMEL-216ENST00000550590 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
PMEL-216ENST00000550590 GALR2O43603 387 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms