RNA–Protein interactions for RNA: ENST00000549260.5

CHST11-205, Transcript of carbohydrate sulfotransferase 11, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHST11, Length 5,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST11-205ENST00000549260 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
CHST11-205ENST00000549260 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
CHST11-205ENST00000549260 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
CHST11-205ENST00000549260 MT4P47944 62 aa5.43□□□□□ -1.54
CHST11-205ENST00000549260 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
CHST11-205ENST00000549260 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.54
CHST11-205ENST00000549260 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
CHST11-205ENST00000549260 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
CHST11-205ENST00000549260 MT1EP04732 61 aa5.38□□□□□ -1.55
CHST11-205ENST00000549260 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
CHST11-205ENST00000549260 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
CHST11-205ENST00000549260 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
CHST11-205ENST00000549260 MT1MQ8N339 61 aa5.25□□□□□ -1.57
CHST11-205ENST00000549260 LCE1BQ5T7P3 118 aa5.23□□□□□ -1.57
CHST11-205ENST00000549260 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
CHST11-205ENST00000549260 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
CHST11-205ENST00000549260 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
CHST11-205ENST00000549260 HMCN2Q8NDA2 5059 aa5.21□□□□□ -1.58
CHST11-205ENST00000549260 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
CHST11-205ENST00000549260 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
CHST11-205ENST00000549260 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
CHST11-205ENST00000549260 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
CHST11-205ENST00000549260 MT1AP04731 61 aa5.05□□□□□ -1.6
CHST11-205ENST00000549260 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
CHST11-205ENST00000549260 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
CHST11-205ENST00000549260 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
CHST11-205ENST00000549260 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
CHST11-205ENST00000549260 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
CHST11-205ENST00000549260 MUC2Q02817 5179 aa4.91□□□□□ -1.62
CHST11-205ENST00000549260 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
CHST11-205ENST00000549260 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
CHST11-205ENST00000549260 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
CHST11-205ENST00000549260 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
CHST11-205ENST00000549260 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
CHST11-205ENST00000549260 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
CHST11-205ENST00000549260 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
CHST11-205ENST00000549260 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
CHST11-205ENST00000549260 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
CHST11-205ENST00000549260 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
CHST11-205ENST00000549260 NEBP20929 6669 aa4.5□□□□□ -1.69
CHST11-205ENST00000549260 USH2AO75445 5202 aa4.42□□□□□ -1.7
CHST11-205ENST00000549260 KRTAP5-9P26371 169 aa4.4□□□□□ -1.71
CHST11-205ENST00000549260 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
CHST11-205ENST00000549260 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
CHST11-205ENST00000549260 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
CHST11-205ENST00000549260 KMT2DO14686 5537 aa4.24□□□□□ -1.73
CHST11-205ENST00000549260 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
CHST11-205ENST00000549260 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
CHST11-205ENST00000549260 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
CHST11-205ENST00000549260 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
CHST11-205ENST00000549260 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CHST11-205ENST00000549260 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
CHST11-205ENST00000549260 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
CHST11-205ENST00000549260 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
CHST11-205ENST00000549260 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
CHST11-205ENST00000549260 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
CHST11-205ENST00000549260 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
CHST11-205ENST00000549260 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
CHST11-205ENST00000549260 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
CHST11-205ENST00000549260 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
CHST11-205ENST00000549260 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
CHST11-205ENST00000549260 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
CHST11-205ENST00000549260 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
CHST11-205ENST00000549260 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
CHST11-205ENST00000549260 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
CHST11-205ENST00000549260 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CHST11-205ENST00000549260 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
CHST11-205ENST00000549260 PHGR1C9JFL3 82 aa2.9□□□□□ -1.94
CHST11-205ENST00000549260 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
CHST11-205ENST00000549260 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
CHST11-205ENST00000549260 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
CHST11-205ENST00000549260 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
CHST11-205ENST00000549260 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
CHST11-205ENST00000549260 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CHST11-205ENST00000549260 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
CHST11-205ENST00000549260 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CHST11-205ENST00000549260 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms