RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 SPRR2DP22532 72 aa4.61□□□□□ -1.67
ITGAM-202ENST00000544665 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
ITGAM-202ENST00000544665 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
ITGAM-202ENST00000544665 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
ITGAM-202ENST00000544665 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
ITGAM-202ENST00000544665 MT1MQ8N339 61 aa4.55□□□□□ -1.68
ITGAM-202ENST00000544665 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
ITGAM-202ENST00000544665 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
ITGAM-202ENST00000544665 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
ITGAM-202ENST00000544665 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
ITGAM-202ENST00000544665 KRTAP2-3P0C7H8 128 aa4.3□□□□□ -1.72
ITGAM-202ENST00000544665 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
ITGAM-202ENST00000544665 KRTAP2-4Q9BYR9 128 aa4.3□□□□□ -1.72
ITGAM-202ENST00000544665 KRTAP2-1Q9BYU5 128 aa4.3□□□□□ -1.72
ITGAM-202ENST00000544665 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
ITGAM-202ENST00000544665 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
ITGAM-202ENST00000544665 MT3P25713 68 aa4.22□□□□□ -1.73
ITGAM-202ENST00000544665 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
ITGAM-202ENST00000544665 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.73
ITGAM-202ENST00000544665 PRM1P04553 51 aa4.19□□□□□ -1.74
ITGAM-202ENST00000544665 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
ITGAM-202ENST00000544665 USH2AO75445 5202 aa4.18□□□□□ -1.74
ITGAM-202ENST00000544665 MT1AP04731 61 aa4.17□□□□□ -1.74
ITGAM-202ENST00000544665 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
ITGAM-202ENST00000544665 MT4P47944 62 aa4.15□□□□□ -1.75
ITGAM-202ENST00000544665 KMT2DO14686 5537 aa4.15□□□□□ -1.75
ITGAM-202ENST00000544665 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
ITGAM-202ENST00000544665 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
ITGAM-202ENST00000544665 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
ITGAM-202ENST00000544665 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
ITGAM-202ENST00000544665 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
ITGAM-202ENST00000544665 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
ITGAM-202ENST00000544665 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
ITGAM-202ENST00000544665 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
ITGAM-202ENST00000544665 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
ITGAM-202ENST00000544665 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
ITGAM-202ENST00000544665 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
ITGAM-202ENST00000544665 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
ITGAM-202ENST00000544665 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
ITGAM-202ENST00000544665 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
ITGAM-202ENST00000544665 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
ITGAM-202ENST00000544665 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
ITGAM-202ENST00000544665 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
ITGAM-202ENST00000544665 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
ITGAM-202ENST00000544665 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
ITGAM-202ENST00000544665 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
ITGAM-202ENST00000544665 NEBP20929 6669 aa3.32□□□□□ -1.88
ITGAM-202ENST00000544665 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
ITGAM-202ENST00000544665 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
ITGAM-202ENST00000544665 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
ITGAM-202ENST00000544665 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
ITGAM-202ENST00000544665 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
ITGAM-202ENST00000544665 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
ITGAM-202ENST00000544665 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
ITGAM-202ENST00000544665 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
ITGAM-202ENST00000544665 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
ITGAM-202ENST00000544665 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
ITGAM-202ENST00000544665 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
ITGAM-202ENST00000544665 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
ITGAM-202ENST00000544665 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
ITGAM-202ENST00000544665 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
ITGAM-202ENST00000544665 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
ITGAM-202ENST00000544665 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
ITGAM-202ENST00000544665 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
ITGAM-202ENST00000544665 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
ITGAM-202ENST00000544665 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
ITGAM-202ENST00000544665 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
ITGAM-202ENST00000544665 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
ITGAM-202ENST00000544665 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
ITGAM-202ENST00000544665 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
ITGAM-202ENST00000544665 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
ITGAM-202ENST00000544665 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
ITGAM-202ENST00000544665 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
ITGAM-202ENST00000544665 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
ITGAM-202ENST00000544665 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
ITGAM-202ENST00000544665 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
ITGAM-202ENST00000544665 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 31.3 ms