RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 MUC2Q02817 5179 aa2.8□□□□□ -1.96
TRIM59-208ENST00000543469 SPRR2DP22532 72 aa2.8□□□□□ -1.96
TRIM59-208ENST00000543469 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
TRIM59-208ENST00000543469 MT1LQ93083 61 aa2.79□□□□□ -1.96
TRIM59-208ENST00000543469 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
TRIM59-208ENST00000543469 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
TRIM59-208ENST00000543469 USH2AO75445 5202 aa2.74□□□□□ -1.97
TRIM59-208ENST00000543469 KRTAP9-7A8MTY7 169 aa2.73□□□□□ -1.97
TRIM59-208ENST00000543469 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
TRIM59-208ENST00000543469 MT1MQ8N339 61 aa2.71□□□□□ -1.98
TRIM59-208ENST00000543469 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
TRIM59-208ENST00000543469 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
TRIM59-208ENST00000543469 INE1O15225 51 aa2.62□□□□□ -1.99
TRIM59-208ENST00000543469 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
TRIM59-208ENST00000543469 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
TRIM59-208ENST00000543469 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
TRIM59-208ENST00000543469 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
TRIM59-208ENST00000543469 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -2
TRIM59-208ENST00000543469 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
TRIM59-208ENST00000543469 LCE4AQ5TA78 99 aa2.53□□□□□ -2
TRIM59-208ENST00000543469 KRTAP2-2Q9BYT5 123 aa2.53□□□□□ -2.01
TRIM59-208ENST00000543469 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2.01
TRIM59-208ENST00000543469 MT1AP04731 61 aa2.5□□□□□ -2.01
TRIM59-208ENST00000543469 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
TRIM59-208ENST00000543469 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
TRIM59-208ENST00000543469 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
TRIM59-208ENST00000543469 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
TRIM59-208ENST00000543469 MT3P25713 68 aa2.41□□□□□ -2.02
TRIM59-208ENST00000543469 NEBP20929 6669 aa2.4□□□□□ -2.02
TRIM59-208ENST00000543469 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
TRIM59-208ENST00000543469 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
TRIM59-208ENST00000543469 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
TRIM59-208ENST00000543469 MT4P47944 62 aa2.31□□□□□ -2.04
TRIM59-208ENST00000543469 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
TRIM59-208ENST00000543469 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
TRIM59-208ENST00000543469 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
TRIM59-208ENST00000543469 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
TRIM59-208ENST00000543469 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
TRIM59-208ENST00000543469 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
TRIM59-208ENST00000543469 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
TRIM59-208ENST00000543469 KMT2DO14686 5537 aa2.22□□□□□ -2.05
TRIM59-208ENST00000543469 LCE1DQ5T752 114 aa2.2□□□□□ -2.06
TRIM59-208ENST00000543469 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
TRIM59-208ENST00000543469 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
TRIM59-208ENST00000543469 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
TRIM59-208ENST00000543469 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
TRIM59-208ENST00000543469 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
TRIM59-208ENST00000543469 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
TRIM59-208ENST00000543469 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
TRIM59-208ENST00000543469 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
TRIM59-208ENST00000543469 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
TRIM59-208ENST00000543469 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
TRIM59-208ENST00000543469 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
TRIM59-208ENST00000543469 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
TRIM59-208ENST00000543469 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
TRIM59-208ENST00000543469 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
TRIM59-208ENST00000543469 PRM1P04553 51 aa1.84□□□□□ -2.11
TRIM59-208ENST00000543469 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.12
TRIM59-208ENST00000543469 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
TRIM59-208ENST00000543469 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.12
TRIM59-208ENST00000543469 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
TRIM59-208ENST00000543469 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
TRIM59-208ENST00000543469 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
TRIM59-208ENST00000543469 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
TRIM59-208ENST00000543469 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
TRIM59-208ENST00000543469 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.13
TRIM59-208ENST00000543469 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
TRIM59-208ENST00000543469 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
TRIM59-208ENST00000543469 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
TRIM59-208ENST00000543469 LCE1FQ5T754 118 aa1.58□□□□□ -2.16
TRIM59-208ENST00000543469 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
TRIM59-208ENST00000543469 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
TRIM59-208ENST00000543469 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
TRIM59-208ENST00000543469 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
TRIM59-208ENST00000543469 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
TRIM59-208ENST00000543469 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
TRIM59-208ENST00000543469 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 456 ms