RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 LCE1EQ5T753 118 aa2.04□□□□□ -2.08
DMD-228ENST00000541735 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
DMD-228ENST00000541735 LCE1AQ5T7P2 110 aa2.04□□□□□ -2.08
DMD-228ENST00000541735 KRTAP4-9Q9BYQ8 210 aa2.03□□□□□ -2.08
DMD-228ENST00000541735 PKD1P98161 4303 aa2.03□□□□□ -2.08
DMD-228ENST00000541735 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
DMD-228ENST00000541735 KRTAP4-3Q9BYR4 195 aa2.03□□□□□ -2.08
DMD-228ENST00000541735 HERC2O95714 4834 aa2.03□□□□□ -2.09
DMD-228ENST00000541735 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.09
DMD-228ENST00000541735 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
DMD-228ENST00000541735 PKHD1L1Q86WI1 4243 aa2.01□□□□□ -2.09
DMD-228ENST00000541735 KRTAP9-7A8MTY7 169 aa2.01□□□□□ -2.09
DMD-228ENST00000541735 RYR2Q92736 4967 aa1.99□□□□□ -2.09
DMD-228ENST00000541735 PRM1P04553 51 aa1.98□□□□□ -2.09
DMD-228ENST00000541735 EPPK1P58107 5090 aaKnown RBP1.98□□□□□ -2.09
DMD-228ENST00000541735 HERC1Q15751 4861 aa1.97□□□□□ -2.09
DMD-228ENST00000541735 TNXBP22105 4242 aa1.94□□□□□ -2.1
DMD-228ENST00000541735 MT1LQ93083 61 aa1.94□□□□□ -2.1
DMD-228ENST00000541735 MT1EP04732 61 aa1.92□□□□□ -2.1
DMD-228ENST00000541735 MT1MQ8N339 61 aa1.92□□□□□ -2.1
DMD-228ENST00000541735 MUC2Q02817 5179 aa1.89□□□□□ -2.11
DMD-228ENST00000541735 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
DMD-228ENST00000541735 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
DMD-228ENST00000541735 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
DMD-228ENST00000541735 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
DMD-228ENST00000541735 UBR4Q5T4S7 5183 aa1.85□□□□□ -2.11
DMD-228ENST00000541735 MUC17Q685J3 4493 aa1.85□□□□□ -2.11
DMD-228ENST00000541735 SSPOA2VEC9 5147 aa1.83□□□□□ -2.12
DMD-228ENST00000541735 ABCA13Q86UQ4 5058 aa1.83□□□□□ -2.12
DMD-228ENST00000541735 FLGP20930 4061 aaPredicted RBP1.82□□□□□ -2.12
DMD-228ENST00000541735 RNF213Q63HN8 5207 aa1.81□□□□□ -2.12
DMD-228ENST00000541735 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
DMD-228ENST00000541735 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
DMD-228ENST00000541735 LCE4AQ5TA78 99 aa1.79□□□□□ -2.12
DMD-228ENST00000541735 FAT4Q6V0I7 4981 aa1.77□□□□□ -2.13
DMD-228ENST00000541735 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
DMD-228ENST00000541735 KRTAP2-2Q9BYT5 123 aa1.77□□□□□ -2.13
DMD-228ENST00000541735 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
DMD-228ENST00000541735 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
DMD-228ENST00000541735 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
DMD-228ENST00000541735 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
DMD-228ENST00000541735 MT1AP04731 61 aa1.72□□□□□ -2.13
DMD-228ENST00000541735 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
DMD-228ENST00000541735 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
DMD-228ENST00000541735 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
DMD-228ENST00000541735 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.14
DMD-228ENST00000541735 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
DMD-228ENST00000541735 KMT2DO14686 5537 aa1.64□□□□□ -2.15
DMD-228ENST00000541735 KRTAP19-7Q3SYF9 63 aa1.63□□□□□ -2.15
DMD-228ENST00000541735 USH2AO75445 5202 aa1.61□□□□□ -2.15
DMD-228ENST00000541735 DSTQ03001 7570 aaKnown RBP1.6□□□□□ -2.15
DMD-228ENST00000541735 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
DMD-228ENST00000541735 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
DMD-228ENST00000541735 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.16
DMD-228ENST00000541735 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
DMD-228ENST00000541735 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
DMD-228ENST00000541735 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
DMD-228ENST00000541735 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
DMD-228ENST00000541735 KRTAP9-6A8MVA2 160 aa1.45□□□□□ -2.18
DMD-228ENST00000541735 NEBP20929 6669 aa1.45□□□□□ -2.18
DMD-228ENST00000541735 MUC12Q9UKN1 5478 aa1.44□□□□□ -2.18
DMD-228ENST00000541735 KRTAP5-3Q6L8H2 238 aa1.43□□□□□ -2.18
DMD-228ENST00000541735 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
DMD-228ENST00000541735 KRTAP5-9P26371 169 aa1.36□□□□□ -2.19
DMD-228ENST00000541735 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
DMD-228ENST00000541735 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
DMD-228ENST00000541735 KRTAP5-5Q701N2 237 aaPredicted RBP1.25□□□□□ -2.21
DMD-228ENST00000541735 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
DMD-228ENST00000541735 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
DMD-228ENST00000541735 KRTAP5-4Q6L8H1 288 aa1.2□□□□□ -2.22
DMD-228ENST00000541735 KRTAP5-8O75690 187 aa1.09□□□□□ -2.23
DMD-228ENST00000541735 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
DMD-228ENST00000541735 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
DMD-228ENST00000541735 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
DMD-228ENST00000541735 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
DMD-228ENST00000541735 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
DMD-228ENST00000541735 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 300.2 ms