RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 CYSTM1Q9H1C7 97 aa2.64□□□□□ -1.99
TTR-203ENST00000541025 KMT2DO14686 5537 aa2.63□□□□□ -1.99
TTR-203ENST00000541025 CHKB-CPT1BH3BT56 60 aa2.63□□□□□ -1.99
TTR-203ENST00000541025 K7ERS5 55 aa2.63□□□□□ -1.99
TTR-203ENST00000541025 COX7CP15954 63 aa2.63□□□□□ -1.99
TTR-203ENST00000541025 LINC01554Q52M75 96 aa2.62□□□□□ -1.99
TTR-203ENST00000541025 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
TTR-203ENST00000541025 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
TTR-203ENST00000541025 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
TTR-203ENST00000541025 H7BZZ5 65 aa2.6□□□□□ -1.99
TTR-203ENST00000541025 COA5Q86WW8 74 aa2.59□□□□□ -1.99
TTR-203ENST00000541025 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
TTR-203ENST00000541025 PRO2289Q9P1D8 64 aa2.57□□□□□ -2
TTR-203ENST00000541025 MDN1Q9NU22 5596 aa2.55□□□□□ -2
TTR-203ENST00000541025 CCDC179H3BU77 68 aa2.54□□□□□ -2
TTR-203ENST00000541025 NEBP20929 6669 aa2.53□□□□□ -2
TTR-203ENST00000541025 A0A1B0GU33 70 aa2.51□□□□□ -2.01
TTR-203ENST00000541025 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
TTR-203ENST00000541025 SPATA8Q6RVD6 105 aa2.49□□□□□ -2.01
TTR-203ENST00000541025 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
TTR-203ENST00000541025 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
TTR-203ENST00000541025 SERP1Q9Y6X1 66 aa2.48□□□□□ -2.01
TTR-203ENST00000541025 A0A0D9SG42 100 aa2.47□□□□□ -2.01
TTR-203ENST00000541025 A6NED7 52 aa2.45□□□□□ -2.02
TTR-203ENST00000541025 SPRR2EP22531 72 aa2.45□□□□□ -2.02
TTR-203ENST00000541025 SPRR2BP35325 72 aa2.45□□□□□ -2.02
TTR-203ENST00000541025 SPRR2AP35326 72 aa2.45□□□□□ -2.02
TTR-203ENST00000541025 A0A1B0GU69 56 aa2.44□□□□□ -2.02
TTR-203ENST00000541025 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
TTR-203ENST00000541025 ATP5EP56381 51 aaPredicted RBP2.43□□□□□ -2.02
TTR-203ENST00000541025 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
TTR-203ENST00000541025 TMEM258P61165 79 aa2.4□□□□□ -2.03
TTR-203ENST00000541025 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
TTR-203ENST00000541025 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
TTR-203ENST00000541025 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
TTR-203ENST00000541025 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
TTR-203ENST00000541025 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
TTR-203ENST00000541025 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
TTR-203ENST00000541025 SPRR2DP22532 72 aa2.35□□□□□ -2.03
TTR-203ENST00000541025 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
TTR-203ENST00000541025 MT1EP04732 61 aa2.33□□□□□ -2.04
TTR-203ENST00000541025 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
TTR-203ENST00000541025 KRTAP19-5Q3LI72 72 aa2.31□□□□□ -2.04
TTR-203ENST00000541025 UQCR11O14957 56 aa2.3□□□□□ -2.04
TTR-203ENST00000541025 KRTAP2-1Q9BYU5 128 aa2.3□□□□□ -2.04
TTR-203ENST00000541025 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
TTR-203ENST00000541025 TNP1P09430 55 aa2.27□□□□□ -2.05
TTR-203ENST00000541025 MIR22HGQ0VDD5 57 aa2.26□□□□□ -2.05
TTR-203ENST00000541025 Q1T7F1 81 aa2.26□□□□□ -2.05
TTR-203ENST00000541025 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
TTR-203ENST00000541025 MT1LQ93083 61 aa2.24□□□□□ -2.05
TTR-203ENST00000541025 MT1GP13640 62 aa2.22□□□□□ -2.05
TTR-203ENST00000541025 MT1MQ8N339 61 aa2.21□□□□□ -2.06
TTR-203ENST00000541025 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
TTR-203ENST00000541025 RPS28P62857 69 aaKnown RBP2.17□□□□□ -2.06
TTR-203ENST00000541025 PMAIP1Q13794 54 aa2.15□□□□□ -2.07
TTR-203ENST00000541025 MT4P47944 62 aa2.08□□□□□ -2.08
TTR-203ENST00000541025 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
TTR-203ENST00000541025 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
TTR-203ENST00000541025 ROMO1P60602 79 aa2.06□□□□□ -2.08
TTR-203ENST00000541025 KTN1-AS1Q86SY8 53 aa2.01□□□□□ -2.09
TTR-203ENST00000541025 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
TTR-203ENST00000541025 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.09
TTR-203ENST00000541025 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
TTR-203ENST00000541025 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
TTR-203ENST00000541025 BRK1Q8WUW1 75 aa1.92□□□□□ -2.1
TTR-203ENST00000541025 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
TTR-203ENST00000541025 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
TTR-203ENST00000541025 MT1AP04731 61 aa1.89□□□□□ -2.11
TTR-203ENST00000541025 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
TTR-203ENST00000541025 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
TTR-203ENST00000541025 MUC5ACP98088 5654 aa1.59□□□□□ -2.16
TTR-203ENST00000541025 INE1O15225 51 aa1.57□□□□□ -2.16
TTR-203ENST00000541025 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
TTR-203ENST00000541025 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
TTR-203ENST00000541025 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
TTR-203ENST00000541025 PRM1P04553 51 aa1.08□□□□□ -2.24
TTR-203ENST00000541025 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms