RNA–Protein interactions for RNA: ENST00000540684.5

LINC00944-202, long intergenic non-protein coding RNA 944, humanhuman

TSL 1 (best) BASIC

Gene LINC00944, Length 888 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00944-202ENST00000540684 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
LINC00944-202ENST00000540684 EPPK1P58107 5090 aaKnown RBP1.93□□□□□ -2.1
LINC00944-202ENST00000540684 KRTAP10-4P60372 401 aaPredicted RBP1.91□□□□□ -2.1
LINC00944-202ENST00000540684 KIAA1109Q2LD37 5005 aa1.89□□□□□ -2.11
LINC00944-202ENST00000540684 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
LINC00944-202ENST00000540684 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
LINC00944-202ENST00000540684 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
LINC00944-202ENST00000540684 ABCA13Q86UQ4 5058 aa1.85□□□□□ -2.11
LINC00944-202ENST00000540684 HERC2O95714 4834 aa1.82□□□□□ -2.12
LINC00944-202ENST00000540684 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
LINC00944-202ENST00000540684 SMR3BP02814 79 aaPredicted RBP1.82□□□□□ -2.12
LINC00944-202ENST00000540684 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
LINC00944-202ENST00000540684 M0R2T5 61 aa1.79□□□□□ -2.12
LINC00944-202ENST00000540684 LPAP08519 4548 aa1.78□□□□□ -2.12
LINC00944-202ENST00000540684 HERC1Q15751 4861 aa1.78□□□□□ -2.13
LINC00944-202ENST00000540684 MT1HL1P0DM35 61 aa1.77□□□□□ -2.13
LINC00944-202ENST00000540684 LRP2P98164 4655 aa1.76□□□□□ -2.13
LINC00944-202ENST00000540684 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
LINC00944-202ENST00000540684 PCLOQ9Y6V0 5065 aa1.75□□□□□ -2.13
LINC00944-202ENST00000540684 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
LINC00944-202ENST00000540684 SPRR2GQ9BYE4 73 aa1.72□□□□□ -2.13
LINC00944-202ENST00000540684 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
LINC00944-202ENST00000540684 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
LINC00944-202ENST00000540684 KRTAP4-1Q9BYQ7 146 aa1.65□□□□□ -2.15
LINC00944-202ENST00000540684 RNF213Q63HN8 5207 aa1.63□□□□□ -2.15
LINC00944-202ENST00000540684 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
LINC00944-202ENST00000540684 MUC2Q02817 5179 aa1.61□□□□□ -2.15
LINC00944-202ENST00000540684 KRTAP19-8Q3LI54 63 aa1.6□□□□□ -2.15
LINC00944-202ENST00000540684 UBR4Q5T4S7 5183 aa1.59□□□□□ -2.15
LINC00944-202ENST00000540684 MT1AP04731 61 aa1.57□□□□□ -2.16
LINC00944-202ENST00000540684 FAT4Q6V0I7 4981 aa1.56□□□□□ -2.16
LINC00944-202ENST00000540684 PRM1P04553 51 aa1.56□□□□□ -2.16
LINC00944-202ENST00000540684 MT1XP80297 61 aa1.56□□□□□ -2.16
LINC00944-202ENST00000540684 MT1EP04732 61 aa1.5□□□□□ -2.17
LINC00944-202ENST00000540684 MT1HP80294 61 aa1.48□□□□□ -2.17
LINC00944-202ENST00000540684 MT1BP07438 61 aa1.46□□□□□ -2.18
LINC00944-202ENST00000540684 MT1LQ93083 61 aa1.45□□□□□ -2.18
LINC00944-202ENST00000540684 MT2AP02795 61 aa1.43□□□□□ -2.18
LINC00944-202ENST00000540684 MT1FP04733 61 aa1.43□□□□□ -2.18
LINC00944-202ENST00000540684 SYNE1Q8NF91 8797 aaKnown RBP1.41□□□□□ -2.18
LINC00944-202ENST00000540684 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
LINC00944-202ENST00000540684 USH2AO75445 5202 aa1.38□□□□□ -2.19
LINC00944-202ENST00000540684 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
LINC00944-202ENST00000540684 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
LINC00944-202ENST00000540684 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
LINC00944-202ENST00000540684 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
LINC00944-202ENST00000540684 SPRR2BP35325 72 aa1.35□□□□□ -2.19
LINC00944-202ENST00000540684 SPRR2AP35326 72 aa1.35□□□□□ -2.19
LINC00944-202ENST00000540684 SPRR2DP22532 72 aa1.31□□□□□ -2.2
LINC00944-202ENST00000540684 KMT2DO14686 5537 aa1.31□□□□□ -2.2
LINC00944-202ENST00000540684 SPRR2EP22531 72 aa1.29□□□□□ -2.2
LINC00944-202ENST00000540684 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
LINC00944-202ENST00000540684 KRTAP19-6Q3LI70 58 aa1.23□□□□□ -2.21
LINC00944-202ENST00000540684 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
LINC00944-202ENST00000540684 MT1GP13640 62 aa1.2□□□□□ -2.22
LINC00944-202ENST00000540684 KRTAP19-3Q7Z4W3 81 aa1.2□□□□□ -2.22
LINC00944-202ENST00000540684 MT1MQ8N339 61 aa1.19□□□□□ -2.22
LINC00944-202ENST00000540684 MUC12Q9UKN1 5478 aa1.18□□□□□ -2.22
LINC00944-202ENST00000540684 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
LINC00944-202ENST00000540684 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
LINC00944-202ENST00000540684 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
LINC00944-202ENST00000540684 HMCN1Q96RW7 5635 aa1.12□□□□□ -2.23
LINC00944-202ENST00000540684 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
LINC00944-202ENST00000540684 SYNE2Q8WXH0 6885 aaKnown RBP1.1□□□□□ -2.23
LINC00944-202ENST00000540684 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
LINC00944-202ENST00000540684 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
LINC00944-202ENST00000540684 NEBP20929 6669 aa0.99□□□□□ -2.25
LINC00944-202ENST00000540684 MUC5ACP98088 5654 aa0.87□□□□□ -2.27
LINC00944-202ENST00000540684 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
LINC00944-202ENST00000540684 MT4P47944 62 aa0.83□□□□□ -2.28
LINC00944-202ENST00000540684 KRTAP20-1Q3LI63 56 aa0.82□□□□□ -2.28
LINC00944-202ENST00000540684 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
LINC00944-202ENST00000540684 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
LINC00944-202ENST00000540684 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
LINC00944-202ENST00000540684 GPR98Q8WXG9 6306 aa0.62□□□□□ -2.31
LINC00944-202ENST00000540684 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
LINC00944-202ENST00000540684 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 100.7 ms