RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 TNXBP22105 4242 aa1.99□□□□□ -2.09
MDM2-226ENST00000540352 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
MDM2-226ENST00000540352 HERC1Q15751 4861 aa1.97□□□□□ -2.09
MDM2-226ENST00000540352 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
MDM2-226ENST00000540352 KRTAP10-4P60372 401 aaPredicted RBP1.93□□□□□ -2.1
MDM2-226ENST00000540352 LPAP08519 4548 aa1.9□□□□□ -2.11
MDM2-226ENST00000540352 HMCN2Q8NDA2 5059 aa1.89□□□□□ -2.11
MDM2-226ENST00000540352 LRP2P98164 4655 aa1.87□□□□□ -2.11
MDM2-226ENST00000540352 MT1HL1P0DM35 61 aa1.86□□□□□ -2.11
MDM2-226ENST00000540352 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
MDM2-226ENST00000540352 MUC17Q685J3 4493 aa1.83□□□□□ -2.12
MDM2-226ENST00000540352 KRTAP8-1Q8IUC2 63 aa1.83□□□□□ -2.12
MDM2-226ENST00000540352 FLGP20930 4061 aaPredicted RBP1.83□□□□□ -2.12
MDM2-226ENST00000540352 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
MDM2-226ENST00000540352 RNF213Q63HN8 5207 aa1.79□□□□□ -2.12
MDM2-226ENST00000540352 MUC2Q02817 5179 aa1.74□□□□□ -2.13
MDM2-226ENST00000540352 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
MDM2-226ENST00000540352 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
MDM2-226ENST00000540352 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
MDM2-226ENST00000540352 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
MDM2-226ENST00000540352 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
MDM2-226ENST00000540352 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
MDM2-226ENST00000540352 M0R2T5 61 aa1.7□□□□□ -2.14
MDM2-226ENST00000540352 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
MDM2-226ENST00000540352 KRTAP4-1Q9BYQ7 146 aa1.68□□□□□ -2.14
MDM2-226ENST00000540352 SPRR2GQ9BYE4 73 aa1.66□□□□□ -2.14
MDM2-226ENST00000540352 KRTAP19-2Q3LHN2 52 aa1.62□□□□□ -2.15
MDM2-226ENST00000540352 KRTAP6-3Q3LI67 103 aa1.6□□□□□ -2.15
MDM2-226ENST00000540352 KRTAP12-4P60329 112 aa1.59□□□□□ -2.16
MDM2-226ENST00000540352 MT1HP80294 61 aa1.57□□□□□ -2.16
MDM2-226ENST00000540352 KRTAP19-5Q3LI72 72 aa1.56□□□□□ -2.16
MDM2-226ENST00000540352 KRTAP19-8Q3LI54 63 aa1.53□□□□□ -2.16
MDM2-226ENST00000540352 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
MDM2-226ENST00000540352 USH2AO75445 5202 aa1.5□□□□□ -2.17
MDM2-226ENST00000540352 MT1XP80297 61 aa1.5□□□□□ -2.17
MDM2-226ENST00000540352 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
MDM2-226ENST00000540352 MT2AP02795 61 aa1.48□□□□□ -2.17
MDM2-226ENST00000540352 MT1FP04733 61 aa1.47□□□□□ -2.17
MDM2-226ENST00000540352 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
MDM2-226ENST00000540352 PRM1P04553 51 aa1.43□□□□□ -2.18
MDM2-226ENST00000540352 MT1BP07438 61 aa1.42□□□□□ -2.18
MDM2-226ENST00000540352 MT1AP04731 61 aa1.41□□□□□ -2.18
MDM2-226ENST00000540352 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
MDM2-226ENST00000540352 MT1EP04732 61 aa1.4□□□□□ -2.19
MDM2-226ENST00000540352 CRCT1Q9UGL9 99 aa1.39□□□□□ -2.19
MDM2-226ENST00000540352 MT1LQ93083 61 aa1.37□□□□□ -2.19
MDM2-226ENST00000540352 KRTAP19-6Q3LI70 58 aa1.35□□□□□ -2.19
MDM2-226ENST00000540352 KRTAP19-7Q3SYF9 63 aa1.34□□□□□ -2.2
MDM2-226ENST00000540352 KMT2DO14686 5537 aa1.33□□□□□ -2.2
MDM2-226ENST00000540352 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
MDM2-226ENST00000540352 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
MDM2-226ENST00000540352 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
MDM2-226ENST00000540352 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
MDM2-226ENST00000540352 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
MDM2-226ENST00000540352 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
MDM2-226ENST00000540352 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
MDM2-226ENST00000540352 SPRR2AP35326 72 aa1.24□□□□□ -2.21
MDM2-226ENST00000540352 MT1GP13640 62 aa1.23□□□□□ -2.21
MDM2-226ENST00000540352 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
MDM2-226ENST00000540352 SPRR2BP35325 72 aa1.21□□□□□ -2.22
MDM2-226ENST00000540352 SPRR2DP22532 72 aa1.19□□□□□ -2.22
MDM2-226ENST00000540352 SPRR2EP22531 72 aa1.17□□□□□ -2.22
MDM2-226ENST00000540352 MT1MQ8N339 61 aa1.17□□□□□ -2.22
MDM2-226ENST00000540352 NEBP20929 6669 aa1.16□□□□□ -2.22
MDM2-226ENST00000540352 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
MDM2-226ENST00000540352 DSTQ03001 7570 aaKnown RBP1.11□□□□□ -2.23
MDM2-226ENST00000540352 KRTAP6-1Q3LI64 71 aa1.11□□□□□ -2.23
MDM2-226ENST00000540352 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
MDM2-226ENST00000540352 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
MDM2-226ENST00000540352 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
MDM2-226ENST00000540352 MT4P47944 62 aa0.98□□□□□ -2.25
MDM2-226ENST00000540352 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
MDM2-226ENST00000540352 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
MDM2-226ENST00000540352 KRTAP20-2Q3LI61 65 aa0.93□□□□□ -2.26
MDM2-226ENST00000540352 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
MDM2-226ENST00000540352 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
MDM2-226ENST00000540352 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
MDM2-226ENST00000540352 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms