RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-222ENST00000539680 MT1EP04732 61 aa2.88□□□□□ -1.95
ECHDC2-222ENST00000539680 HYDINQ4G0P3 5121 aa2.86□□□□□ -1.95
ECHDC2-222ENST00000539680 MT3P25713 68 aa2.86□□□□□ -1.95
ECHDC2-222ENST00000539680 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
ECHDC2-222ENST00000539680 MT1MQ8N339 61 aa2.8□□□□□ -1.96
ECHDC2-222ENST00000539680 EPPK1P58107 5090 aaKnown RBP2.77□□□□□ -1.97
ECHDC2-222ENST00000539680 PRM1P04553 51 aa2.73□□□□□ -1.97
ECHDC2-222ENST00000539680 KRTAP4-7Q9BYR0 210 aa2.72□□□□□ -1.97
ECHDC2-222ENST00000539680 MT4P47944 62 aa2.72□□□□□ -1.97
ECHDC2-222ENST00000539680 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
ECHDC2-222ENST00000539680 NEBP20929 6669 aa2.7□□□□□ -1.98
ECHDC2-222ENST00000539680 TNXBP22105 4242 aa2.67□□□□□ -1.98
ECHDC2-222ENST00000539680 MT1AP04731 61 aa2.66□□□□□ -1.98
ECHDC2-222ENST00000539680 LCE1AQ5T7P2 110 aa2.66□□□□□ -1.98
ECHDC2-222ENST00000539680 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.98
ECHDC2-222ENST00000539680 LRP2P98164 4655 aa2.65□□□□□ -1.98
ECHDC2-222ENST00000539680 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
ECHDC2-222ENST00000539680 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
ECHDC2-222ENST00000539680 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
ECHDC2-222ENST00000539680 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -2
ECHDC2-222ENST00000539680 LCE4AQ5TA78 99 aa2.58□□□□□ -2
ECHDC2-222ENST00000539680 LPAP08519 4548 aa2.56□□□□□ -2
ECHDC2-222ENST00000539680 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
ECHDC2-222ENST00000539680 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
ECHDC2-222ENST00000539680 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
ECHDC2-222ENST00000539680 RNF213Q63HN8 5207 aa2.52□□□□□ -2.01
ECHDC2-222ENST00000539680 LCE5AQ5TCM9 118 aa2.52□□□□□ -2.01
ECHDC2-222ENST00000539680 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
ECHDC2-222ENST00000539680 HMCN2Q8NDA2 5059 aa2.48□□□□□ -2.01
ECHDC2-222ENST00000539680 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
ECHDC2-222ENST00000539680 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
ECHDC2-222ENST00000539680 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
ECHDC2-222ENST00000539680 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
ECHDC2-222ENST00000539680 UBR4Q5T4S7 5183 aa2.43□□□□□ -2.02
ECHDC2-222ENST00000539680 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
ECHDC2-222ENST00000539680 KRTAP4-9Q9BYQ8 210 aa2.39□□□□□ -2.03
ECHDC2-222ENST00000539680 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
ECHDC2-222ENST00000539680 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
ECHDC2-222ENST00000539680 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
ECHDC2-222ENST00000539680 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
ECHDC2-222ENST00000539680 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
ECHDC2-222ENST00000539680 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
ECHDC2-222ENST00000539680 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
ECHDC2-222ENST00000539680 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
ECHDC2-222ENST00000539680 USH2AO75445 5202 aa2.22□□□□□ -2.05
ECHDC2-222ENST00000539680 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
ECHDC2-222ENST00000539680 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
ECHDC2-222ENST00000539680 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
ECHDC2-222ENST00000539680 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
ECHDC2-222ENST00000539680 MUC2Q02817 5179 aa2.06□□□□□ -2.08
ECHDC2-222ENST00000539680 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
ECHDC2-222ENST00000539680 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
ECHDC2-222ENST00000539680 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
ECHDC2-222ENST00000539680 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
ECHDC2-222ENST00000539680 KMT2DO14686 5537 aa2□□□□□ -2.09
ECHDC2-222ENST00000539680 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
ECHDC2-222ENST00000539680 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
ECHDC2-222ENST00000539680 KRTAP4-11Q9BYQ6 195 aa1.94□□□□□ -2.1
ECHDC2-222ENST00000539680 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
ECHDC2-222ENST00000539680 KRTAP4-2Q9BYR5 136 aa1.91□□□□□ -2.1
ECHDC2-222ENST00000539680 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
ECHDC2-222ENST00000539680 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
ECHDC2-222ENST00000539680 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
ECHDC2-222ENST00000539680 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
ECHDC2-222ENST00000539680 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
ECHDC2-222ENST00000539680 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
ECHDC2-222ENST00000539680 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
ECHDC2-222ENST00000539680 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
ECHDC2-222ENST00000539680 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
ECHDC2-222ENST00000539680 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
ECHDC2-222ENST00000539680 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
ECHDC2-222ENST00000539680 KRTAP5-2Q701N4 177 aa1.52□□□□□ -2.17
ECHDC2-222ENST00000539680 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
ECHDC2-222ENST00000539680 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
ECHDC2-222ENST00000539680 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
ECHDC2-222ENST00000539680 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
ECHDC2-222ENST00000539680 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
ECHDC2-222ENST00000539680 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms