RNA–Protein interactions for RNA: ENST00000538118.5

BCAT1-204, Transcript of branched chain amino acid transaminase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAT1, Length 4,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1-204ENST00000538118 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
BCAT1-204ENST00000538118 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
BCAT1-204ENST00000538118 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
BCAT1-204ENST00000538118 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
BCAT1-204ENST00000538118 MT1MQ8N339 61 aa3.24□□□□□ -1.89
BCAT1-204ENST00000538118 MUC2Q02817 5179 aa3.24□□□□□ -1.89
BCAT1-204ENST00000538118 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
BCAT1-204ENST00000538118 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
BCAT1-204ENST00000538118 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
BCAT1-204ENST00000538118 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
BCAT1-204ENST00000538118 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
BCAT1-204ENST00000538118 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
BCAT1-204ENST00000538118 MT3P25713 68 aa3.07□□□□□ -1.92
BCAT1-204ENST00000538118 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
BCAT1-204ENST00000538118 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
BCAT1-204ENST00000538118 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
BCAT1-204ENST00000538118 PRM1P04553 51 aa3.03□□□□□ -1.92
BCAT1-204ENST00000538118 MT1AP04731 61 aa3□□□□□ -1.93
BCAT1-204ENST00000538118 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
BCAT1-204ENST00000538118 MT4P47944 62 aa2.95□□□□□ -1.94
BCAT1-204ENST00000538118 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
BCAT1-204ENST00000538118 LCE5AQ5TCM9 118 aa2.9□□□□□ -1.94
BCAT1-204ENST00000538118 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
BCAT1-204ENST00000538118 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
BCAT1-204ENST00000538118 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
BCAT1-204ENST00000538118 USH2AO75445 5202 aa2.86□□□□□ -1.95
BCAT1-204ENST00000538118 KRTAP9-6A0A140TA67 174 aa2.86□□□□□ -1.95
BCAT1-204ENST00000538118 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
BCAT1-204ENST00000538118 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
BCAT1-204ENST00000538118 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
BCAT1-204ENST00000538118 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.96
BCAT1-204ENST00000538118 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
BCAT1-204ENST00000538118 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
BCAT1-204ENST00000538118 KMT2DO14686 5537 aa2.77□□□□□ -1.97
BCAT1-204ENST00000538118 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
BCAT1-204ENST00000538118 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
BCAT1-204ENST00000538118 KRTAP9-7A8MTY7 169 aa2.73□□□□□ -1.97
BCAT1-204ENST00000538118 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
BCAT1-204ENST00000538118 MACF1Q9UPN3 7388 aaKnown RBP2.72□□□□□ -1.97
BCAT1-204ENST00000538118 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
BCAT1-204ENST00000538118 LCE4AQ5TA78 99 aa2.65□□□□□ -1.98
BCAT1-204ENST00000538118 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.99
BCAT1-204ENST00000538118 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
BCAT1-204ENST00000538118 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
BCAT1-204ENST00000538118 KRTAP5-9P26371 169 aa2.56□□□□□ -2
BCAT1-204ENST00000538118 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
BCAT1-204ENST00000538118 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
BCAT1-204ENST00000538118 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
BCAT1-204ENST00000538118 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
BCAT1-204ENST00000538118 NEBP20929 6669 aa2.38□□□□□ -2.03
BCAT1-204ENST00000538118 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
BCAT1-204ENST00000538118 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
BCAT1-204ENST00000538118 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
BCAT1-204ENST00000538118 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
BCAT1-204ENST00000538118 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
BCAT1-204ENST00000538118 KRTAP9-9Q9BYP9 154 aa2.2□□□□□ -2.06
BCAT1-204ENST00000538118 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
BCAT1-204ENST00000538118 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
BCAT1-204ENST00000538118 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
BCAT1-204ENST00000538118 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
BCAT1-204ENST00000538118 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
BCAT1-204ENST00000538118 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.09
BCAT1-204ENST00000538118 KRTAP5-3Q6L8H2 238 aa1.88□□□□□ -2.11
BCAT1-204ENST00000538118 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
BCAT1-204ENST00000538118 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
BCAT1-204ENST00000538118 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
BCAT1-204ENST00000538118 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
BCAT1-204ENST00000538118 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
BCAT1-204ENST00000538118 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
BCAT1-204ENST00000538118 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
BCAT1-204ENST00000538118 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
BCAT1-204ENST00000538118 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
BCAT1-204ENST00000538118 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
BCAT1-204ENST00000538118 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
BCAT1-204ENST00000538118 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
BCAT1-204ENST00000538118 KRTAP5-7Q6L8G8 165 aa1.32□□□□□ -2.2
BCAT1-204ENST00000538118 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 60.1 ms