RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
TNC-210ENST00000535648 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
TNC-210ENST00000535648 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
TNC-210ENST00000535648 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
TNC-210ENST00000535648 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
TNC-210ENST00000535648 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
TNC-210ENST00000535648 HYDINQ4G0P3 5121 aa2.8□□□□□ -1.96
TNC-210ENST00000535648 BIRC6Q9NR09 4857 aa2.79□□□□□ -1.96
TNC-210ENST00000535648 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.96
TNC-210ENST00000535648 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
TNC-210ENST00000535648 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
TNC-210ENST00000535648 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
TNC-210ENST00000535648 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
TNC-210ENST00000535648 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
TNC-210ENST00000535648 MT1AP04731 61 aa2.74□□□□□ -1.97
TNC-210ENST00000535648 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
TNC-210ENST00000535648 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
TNC-210ENST00000535648 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
TNC-210ENST00000535648 PCLOQ9Y6V0 5065 aa2.72□□□□□ -1.97
TNC-210ENST00000535648 HERC2O95714 4834 aa2.71□□□□□ -1.98
TNC-210ENST00000535648 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
TNC-210ENST00000535648 LCE2AQ5TA79 106 aaPredicted RBP2.61□□□□□ -1.99
TNC-210ENST00000535648 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
TNC-210ENST00000535648 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
TNC-210ENST00000535648 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
TNC-210ENST00000535648 LCE4AQ5TA78 99 aa2.54□□□□□ -2
TNC-210ENST00000535648 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
TNC-210ENST00000535648 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
TNC-210ENST00000535648 ABCA13Q86UQ4 5058 aa2.5□□□□□ -2.01
TNC-210ENST00000535648 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.49□□□□□ -2.01
TNC-210ENST00000535648 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
TNC-210ENST00000535648 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
TNC-210ENST00000535648 EPPK1P58107 5090 aaKnown RBP2.43□□□□□ -2.02
TNC-210ENST00000535648 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
TNC-210ENST00000535648 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
TNC-210ENST00000535648 UBR4Q5T4S7 5183 aa2.42□□□□□ -2.02
TNC-210ENST00000535648 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
TNC-210ENST00000535648 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
TNC-210ENST00000535648 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
TNC-210ENST00000535648 USH2AO75445 5202 aa2.25□□□□□ -2.05
TNC-210ENST00000535648 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
TNC-210ENST00000535648 MUC2Q02817 5179 aa2.22□□□□□ -2.05
TNC-210ENST00000535648 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
TNC-210ENST00000535648 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
TNC-210ENST00000535648 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
TNC-210ENST00000535648 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.06
TNC-210ENST00000535648 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
TNC-210ENST00000535648 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
TNC-210ENST00000535648 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
TNC-210ENST00000535648 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
TNC-210ENST00000535648 KMT2DO14686 5537 aa2.04□□□□□ -2.08
TNC-210ENST00000535648 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
TNC-210ENST00000535648 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
TNC-210ENST00000535648 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
TNC-210ENST00000535648 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
TNC-210ENST00000535648 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
TNC-210ENST00000535648 NEBP20929 6669 aa1.92□□□□□ -2.1
TNC-210ENST00000535648 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
TNC-210ENST00000535648 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
TNC-210ENST00000535648 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
TNC-210ENST00000535648 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
TNC-210ENST00000535648 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
TNC-210ENST00000535648 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
TNC-210ENST00000535648 KRTAP5-3Q6L8H2 238 aa1.65□□□□□ -2.14
TNC-210ENST00000535648 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
TNC-210ENST00000535648 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
TNC-210ENST00000535648 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
TNC-210ENST00000535648 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
TNC-210ENST00000535648 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
TNC-210ENST00000535648 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
TNC-210ENST00000535648 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
TNC-210ENST00000535648 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
TNC-210ENST00000535648 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
TNC-210ENST00000535648 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
TNC-210ENST00000535648 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
TNC-210ENST00000535648 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
TNC-210ENST00000535648 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 58.8 ms