RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
ZKSCAN1-205ENST00000535170 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
ZKSCAN1-205ENST00000535170 KIAA1109Q2LD37 5005 aa3.2□□□□□ -1.9
ZKSCAN1-205ENST00000535170 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
ZKSCAN1-205ENST00000535170 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
ZKSCAN1-205ENST00000535170 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
ZKSCAN1-205ENST00000535170 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
ZKSCAN1-205ENST00000535170 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
ZKSCAN1-205ENST00000535170 HERC2O95714 4834 aa3.16□□□□□ -1.9
ZKSCAN1-205ENST00000535170 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
ZKSCAN1-205ENST00000535170 LRP2P98164 4655 aa3.15□□□□□ -1.91
ZKSCAN1-205ENST00000535170 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
ZKSCAN1-205ENST00000535170 HYDINQ4G0P3 5121 aa3.05□□□□□ -1.92
ZKSCAN1-205ENST00000535170 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
ZKSCAN1-205ENST00000535170 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
ZKSCAN1-205ENST00000535170 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
ZKSCAN1-205ENST00000535170 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
ZKSCAN1-205ENST00000535170 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
ZKSCAN1-205ENST00000535170 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
ZKSCAN1-205ENST00000535170 LPAP08519 4548 aa2.99□□□□□ -1.93
ZKSCAN1-205ENST00000535170 EPPK1P58107 5090 aaKnown RBP2.95□□□□□ -1.94
ZKSCAN1-205ENST00000535170 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
ZKSCAN1-205ENST00000535170 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
ZKSCAN1-205ENST00000535170 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
ZKSCAN1-205ENST00000535170 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
ZKSCAN1-205ENST00000535170 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
ZKSCAN1-205ENST00000535170 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
ZKSCAN1-205ENST00000535170 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
ZKSCAN1-205ENST00000535170 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
ZKSCAN1-205ENST00000535170 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
ZKSCAN1-205ENST00000535170 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
ZKSCAN1-205ENST00000535170 UBR4Q5T4S7 5183 aa2.79□□□□□ -1.96
ZKSCAN1-205ENST00000535170 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
ZKSCAN1-205ENST00000535170 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
ZKSCAN1-205ENST00000535170 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
ZKSCAN1-205ENST00000535170 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
ZKSCAN1-205ENST00000535170 SYNE1Q8NF91 8797 aaKnown RBP2.69□□□□□ -1.98
ZKSCAN1-205ENST00000535170 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
ZKSCAN1-205ENST00000535170 USH2AO75445 5202 aa2.58□□□□□ -2
ZKSCAN1-205ENST00000535170 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
ZKSCAN1-205ENST00000535170 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
ZKSCAN1-205ENST00000535170 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
ZKSCAN1-205ENST00000535170 MUC2Q02817 5179 aa2.42□□□□□ -2.02
ZKSCAN1-205ENST00000535170 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
ZKSCAN1-205ENST00000535170 NEBP20929 6669 aa2.36□□□□□ -2.03
ZKSCAN1-205ENST00000535170 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
ZKSCAN1-205ENST00000535170 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
ZKSCAN1-205ENST00000535170 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
ZKSCAN1-205ENST00000535170 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
ZKSCAN1-205ENST00000535170 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.05
ZKSCAN1-205ENST00000535170 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
ZKSCAN1-205ENST00000535170 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
ZKSCAN1-205ENST00000535170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
ZKSCAN1-205ENST00000535170 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.06
ZKSCAN1-205ENST00000535170 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
ZKSCAN1-205ENST00000535170 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
ZKSCAN1-205ENST00000535170 KMT2DO14686 5537 aa2.1□□□□□ -2.07
ZKSCAN1-205ENST00000535170 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
ZKSCAN1-205ENST00000535170 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
ZKSCAN1-205ENST00000535170 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.07
ZKSCAN1-205ENST00000535170 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
ZKSCAN1-205ENST00000535170 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
ZKSCAN1-205ENST00000535170 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
ZKSCAN1-205ENST00000535170 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
ZKSCAN1-205ENST00000535170 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
ZKSCAN1-205ENST00000535170 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
ZKSCAN1-205ENST00000535170 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
ZKSCAN1-205ENST00000535170 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
ZKSCAN1-205ENST00000535170 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
ZKSCAN1-205ENST00000535170 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
ZKSCAN1-205ENST00000535170 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
ZKSCAN1-205ENST00000535170 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
ZKSCAN1-205ENST00000535170 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
ZKSCAN1-205ENST00000535170 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
ZKSCAN1-205ENST00000535170 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
ZKSCAN1-205ENST00000535170 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
ZKSCAN1-205ENST00000535170 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 9.9 ms