RNA–Protein interactions for RNA: ENST00000534111.5

TMPRSS4-218, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMPRSS4, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-218ENST00000534111 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
TMPRSS4-218ENST00000534111 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
TMPRSS4-218ENST00000534111 MT1LQ93083 61 aa3.51□□□□□ -1.85
TMPRSS4-218ENST00000534111 HMCN2Q8NDA2 5059 aa3.46□□□□□ -1.86
TMPRSS4-218ENST00000534111 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
TMPRSS4-218ENST00000534111 MT1MQ8N339 61 aa3.43□□□□□ -1.86
TMPRSS4-218ENST00000534111 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
TMPRSS4-218ENST00000534111 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
TMPRSS4-218ENST00000534111 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
TMPRSS4-218ENST00000534111 MT4P47944 62 aa3.39□□□□□ -1.87
TMPRSS4-218ENST00000534111 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
TMPRSS4-218ENST00000534111 MT3P25713 68 aa3.33□□□□□ -1.88
TMPRSS4-218ENST00000534111 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
TMPRSS4-218ENST00000534111 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TMPRSS4-218ENST00000534111 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
TMPRSS4-218ENST00000534111 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
TMPRSS4-218ENST00000534111 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
TMPRSS4-218ENST00000534111 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
TMPRSS4-218ENST00000534111 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
TMPRSS4-218ENST00000534111 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
TMPRSS4-218ENST00000534111 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
TMPRSS4-218ENST00000534111 MUC2Q02817 5179 aa3.19□□□□□ -1.9
TMPRSS4-218ENST00000534111 MT1AP04731 61 aa3.19□□□□□ -1.9
TMPRSS4-218ENST00000534111 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
TMPRSS4-218ENST00000534111 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
TMPRSS4-218ENST00000534111 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
TMPRSS4-218ENST00000534111 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
TMPRSS4-218ENST00000534111 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
TMPRSS4-218ENST00000534111 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
TMPRSS4-218ENST00000534111 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
TMPRSS4-218ENST00000534111 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
TMPRSS4-218ENST00000534111 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
TMPRSS4-218ENST00000534111 PRM1P04553 51 aa2.98□□□□□ -1.93
TMPRSS4-218ENST00000534111 USH2AO75445 5202 aa2.95□□□□□ -1.94
TMPRSS4-218ENST00000534111 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
TMPRSS4-218ENST00000534111 NEBP20929 6669 aa2.9□□□□□ -1.95
TMPRSS4-218ENST00000534111 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
TMPRSS4-218ENST00000534111 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
TMPRSS4-218ENST00000534111 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TMPRSS4-218ENST00000534111 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
TMPRSS4-218ENST00000534111 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
TMPRSS4-218ENST00000534111 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
TMPRSS4-218ENST00000534111 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
TMPRSS4-218ENST00000534111 KMT2DO14686 5537 aa2.72□□□□□ -1.97
TMPRSS4-218ENST00000534111 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
TMPRSS4-218ENST00000534111 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
TMPRSS4-218ENST00000534111 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TMPRSS4-218ENST00000534111 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
TMPRSS4-218ENST00000534111 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
TMPRSS4-218ENST00000534111 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
TMPRSS4-218ENST00000534111 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -1.99
TMPRSS4-218ENST00000534111 MDN1Q9NU22 5596 aa2.57□□□□□ -2
TMPRSS4-218ENST00000534111 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
TMPRSS4-218ENST00000534111 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
TMPRSS4-218ENST00000534111 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
TMPRSS4-218ENST00000534111 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
TMPRSS4-218ENST00000534111 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
TMPRSS4-218ENST00000534111 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
TMPRSS4-218ENST00000534111 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
TMPRSS4-218ENST00000534111 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
TMPRSS4-218ENST00000534111 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
TMPRSS4-218ENST00000534111 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
TMPRSS4-218ENST00000534111 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
TMPRSS4-218ENST00000534111 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
TMPRSS4-218ENST00000534111 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
TMPRSS4-218ENST00000534111 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
TMPRSS4-218ENST00000534111 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
TMPRSS4-218ENST00000534111 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
TMPRSS4-218ENST00000534111 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
TMPRSS4-218ENST00000534111 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
TMPRSS4-218ENST00000534111 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
TMPRSS4-218ENST00000534111 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
TMPRSS4-218ENST00000534111 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
TMPRSS4-218ENST00000534111 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
TMPRSS4-218ENST00000534111 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
TMPRSS4-218ENST00000534111 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
TMPRSS4-218ENST00000534111 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms