RNA–Protein interactions for RNA: ENST00000533724.5

CHORDC1-209, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 2

Gene CHORDC1, Length 5,361 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-209ENST00000533724 SPRR2DP22532 72 aa2.56□□□□□ -2
CHORDC1-209ENST00000533724 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
CHORDC1-209ENST00000533724 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
CHORDC1-209ENST00000533724 LCE1AQ5T7P2 110 aa2.53□□□□□ -2
CHORDC1-209ENST00000533724 MT1MQ8N339 61 aa2.5□□□□□ -2.01
CHORDC1-209ENST00000533724 MUC2Q02817 5179 aa2.48□□□□□ -2.01
CHORDC1-209ENST00000533724 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
CHORDC1-209ENST00000533724 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
CHORDC1-209ENST00000533724 USH2AO75445 5202 aa2.42□□□□□ -2.02
CHORDC1-209ENST00000533724 LCE5AQ5TCM9 118 aa2.41□□□□□ -2.02
CHORDC1-209ENST00000533724 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
CHORDC1-209ENST00000533724 KRTAP9-7A8MTY7 169 aa2.39□□□□□ -2.03
CHORDC1-209ENST00000533724 LCE3BQ5TA77 95 aa2.37□□□□□ -2.03
CHORDC1-209ENST00000533724 KRTAP2-3P0C7H8 128 aa2.32□□□□□ -2.04
CHORDC1-209ENST00000533724 KRTAP2-4Q9BYR9 128 aa2.32□□□□□ -2.04
CHORDC1-209ENST00000533724 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
CHORDC1-209ENST00000533724 MT1AP04731 61 aa2.32□□□□□ -2.04
CHORDC1-209ENST00000533724 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
CHORDC1-209ENST00000533724 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
CHORDC1-209ENST00000533724 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
CHORDC1-209ENST00000533724 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
CHORDC1-209ENST00000533724 MT3P25713 68 aa2.24□□□□□ -2.05
CHORDC1-209ENST00000533724 KRTAP2-2Q9BYT5 123 aa2.24□□□□□ -2.05
CHORDC1-209ENST00000533724 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
CHORDC1-209ENST00000533724 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.05
CHORDC1-209ENST00000533724 LOC100996750A0A140TA64 210 aa2.19□□□□□ -2.06
CHORDC1-209ENST00000533724 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
CHORDC1-209ENST00000533724 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
CHORDC1-209ENST00000533724 KRTAP9-4Q9BYQ2 154 aa2.16□□□□□ -2.06
CHORDC1-209ENST00000533724 NEBP20929 6669 aa2.15□□□□□ -2.06
CHORDC1-209ENST00000533724 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
CHORDC1-209ENST00000533724 FSIP2Q5CZC0 6907 aa2.14□□□□□ -2.07
CHORDC1-209ENST00000533724 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
CHORDC1-209ENST00000533724 MT4P47944 62 aa2.11□□□□□ -2.07
CHORDC1-209ENST00000533724 MACF1Q9UPN3 7388 aaKnown RBP2.09□□□□□ -2.08
CHORDC1-209ENST00000533724 SYNE2Q8WXH0 6885 aaKnown RBP2.05□□□□□ -2.08
CHORDC1-209ENST00000533724 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
CHORDC1-209ENST00000533724 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
CHORDC1-209ENST00000533724 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
CHORDC1-209ENST00000533724 KMT2DO14686 5537 aa1.97□□□□□ -2.09
CHORDC1-209ENST00000533724 KRTAP4-6Q9BYQ5 205 aa1.95□□□□□ -2.1
CHORDC1-209ENST00000533724 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
CHORDC1-209ENST00000533724 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
CHORDC1-209ENST00000533724 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
CHORDC1-209ENST00000533724 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
CHORDC1-209ENST00000533724 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
CHORDC1-209ENST00000533724 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
CHORDC1-209ENST00000533724 PRM1P04553 51 aa1.81□□□□□ -2.12
CHORDC1-209ENST00000533724 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
CHORDC1-209ENST00000533724 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
CHORDC1-209ENST00000533724 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
CHORDC1-209ENST00000533724 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
CHORDC1-209ENST00000533724 KRTAP9-9Q9BYP9 154 aa1.72□□□□□ -2.13
CHORDC1-209ENST00000533724 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
CHORDC1-209ENST00000533724 KRTAP4-11Q9BYQ6 195 aa1.71□□□□□ -2.14
CHORDC1-209ENST00000533724 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
CHORDC1-209ENST00000533724 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
CHORDC1-209ENST00000533724 KRTAP5-8O75690 187 aa1.59□□□□□ -2.16
CHORDC1-209ENST00000533724 HMCN1Q96RW7 5635 aa1.54□□□□□ -2.16
CHORDC1-209ENST00000533724 KRTAP4-2Q9BYR5 136 aa1.52□□□□□ -2.17
CHORDC1-209ENST00000533724 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
CHORDC1-209ENST00000533724 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
CHORDC1-209ENST00000533724 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
CHORDC1-209ENST00000533724 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
CHORDC1-209ENST00000533724 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
CHORDC1-209ENST00000533724 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
CHORDC1-209ENST00000533724 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
CHORDC1-209ENST00000533724 LCE1FQ5T754 118 aa1.44□□□□□ -2.18
CHORDC1-209ENST00000533724 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
CHORDC1-209ENST00000533724 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
CHORDC1-209ENST00000533724 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
CHORDC1-209ENST00000533724 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
CHORDC1-209ENST00000533724 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
CHORDC1-209ENST00000533724 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
CHORDC1-209ENST00000533724 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CHORDC1-209ENST00000533724 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
CHORDC1-209ENST00000533724 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
CHORDC1-209ENST00000533724 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 121.1 ms