RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
CTNND1-236ENST00000533667 LRP2P98164 4655 aa2.33□□□□□ -2.04
CTNND1-236ENST00000533667 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
CTNND1-236ENST00000533667 KRTAP4-8A0A0G2JLE6 195 aa2.32□□□□□ -2.04
CTNND1-236ENST00000533667 MT1LQ93083 61 aa2.31□□□□□ -2.04
CTNND1-236ENST00000533667 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
CTNND1-236ENST00000533667 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
CTNND1-236ENST00000533667 KRTAP9-6A0A140TA67 174 aa2.3□□□□□ -2.04
CTNND1-236ENST00000533667 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
CTNND1-236ENST00000533667 RNF213Q63HN8 5207 aa2.28□□□□□ -2.05
CTNND1-236ENST00000533667 MT1EP04732 61 aa2.26□□□□□ -2.05
CTNND1-236ENST00000533667 FAT4Q6V0I7 4981 aa2.23□□□□□ -2.05
CTNND1-236ENST00000533667 KRTAP19-6Q3LI70 58 aa2.19□□□□□ -2.06
CTNND1-236ENST00000533667 MT1MQ8N339 61 aa2.18□□□□□ -2.06
CTNND1-236ENST00000533667 KRTAP4-7Q9BYR0 210 aa2.18□□□□□ -2.06
CTNND1-236ENST00000533667 PRM1P04553 51 aa2.16□□□□□ -2.06
CTNND1-236ENST00000533667 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
CTNND1-236ENST00000533667 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
CTNND1-236ENST00000533667 LCE1AQ5T7P2 110 aa2.1□□□□□ -2.07
CTNND1-236ENST00000533667 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.08
CTNND1-236ENST00000533667 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.08
CTNND1-236ENST00000533667 KRTAP2-1Q9BYU5 128 aa2.09□□□□□ -2.08
CTNND1-236ENST00000533667 MT1AP04731 61 aa2.07□□□□□ -2.08
CTNND1-236ENST00000533667 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
CTNND1-236ENST00000533667 KRTAP9-7A8MTY7 169 aa2.05□□□□□ -2.08
CTNND1-236ENST00000533667 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
CTNND1-236ENST00000533667 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
CTNND1-236ENST00000533667 MT4P47944 62 aa2.02□□□□□ -2.09
CTNND1-236ENST00000533667 LCE4AQ5TA78 99 aa2.02□□□□□ -2.09
CTNND1-236ENST00000533667 LCE1DQ5T752 114 aa1.98□□□□□ -2.09
CTNND1-236ENST00000533667 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
CTNND1-236ENST00000533667 KRTAP2-2Q9BYT5 123 aa1.98□□□□□ -2.09
CTNND1-236ENST00000533667 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
CTNND1-236ENST00000533667 KRTAP4-9Q9BYQ8 210 aa1.97□□□□□ -2.09
CTNND1-236ENST00000533667 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
CTNND1-236ENST00000533667 USH2AO75445 5202 aa1.93□□□□□ -2.1
CTNND1-236ENST00000533667 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
CTNND1-236ENST00000533667 LCE5AQ5TCM9 118 aa1.89□□□□□ -2.11
CTNND1-236ENST00000533667 KRTAP9-6A8MVA2 160 aa1.88□□□□□ -2.11
CTNND1-236ENST00000533667 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
CTNND1-236ENST00000533667 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CTNND1-236ENST00000533667 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
CTNND1-236ENST00000533667 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
CTNND1-236ENST00000533667 FCGBPQ9Y6R7 5405 aaPredicted RBP1.77□□□□□ -2.13
CTNND1-236ENST00000533667 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
CTNND1-236ENST00000533667 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
CTNND1-236ENST00000533667 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
CTNND1-236ENST00000533667 KMT2DO14686 5537 aa1.73□□□□□ -2.13
CTNND1-236ENST00000533667 LCE1EQ5T753 118 aa1.72□□□□□ -2.13
CTNND1-236ENST00000533667 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
CTNND1-236ENST00000533667 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
CTNND1-236ENST00000533667 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
CTNND1-236ENST00000533667 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
CTNND1-236ENST00000533667 NEBP20929 6669 aa1.65□□□□□ -2.14
CTNND1-236ENST00000533667 MUC12Q9UKN1 5478 aa1.64□□□□□ -2.15
CTNND1-236ENST00000533667 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
CTNND1-236ENST00000533667 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
CTNND1-236ENST00000533667 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
CTNND1-236ENST00000533667 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CTNND1-236ENST00000533667 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
CTNND1-236ENST00000533667 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.17
CTNND1-236ENST00000533667 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
CTNND1-236ENST00000533667 KRTAP5-4Q6L8H1 288 aa1.52□□□□□ -2.17
CTNND1-236ENST00000533667 KRTAP4-4Q9BYR3 166 aa1.47□□□□□ -2.17
CTNND1-236ENST00000533667 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
CTNND1-236ENST00000533667 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
CTNND1-236ENST00000533667 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
CTNND1-236ENST00000533667 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
CTNND1-236ENST00000533667 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
CTNND1-236ENST00000533667 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
CTNND1-236ENST00000533667 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
CTNND1-236ENST00000533667 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
CTNND1-236ENST00000533667 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
CTNND1-236ENST00000533667 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
CTNND1-236ENST00000533667 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
CTNND1-236ENST00000533667 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
CTNND1-236ENST00000533667 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 292.6 ms