RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	KRTAP4-3	Q9BYR4	195 aa		5.9	□□□□□ -1.47
FGFR1-238	ENST00000532791	LCE1B	Q5T7P3	118 aa		5.89	□□□□□ -1.47
FGFR1-238	ENST00000532791	MUC17	Q685J3	4493 aa		5.88	□□□□□ -1.47
FGFR1-238	ENST00000532791	FLG	P20930	4061 aa	Predicted RBP	5.86	□□□□□ -1.47
FGFR1-238	ENST00000532791	LCE1D	Q5T752	114 aa		5.85	□□□□□ -1.47
FGFR1-238	ENST00000532791	TNXB	P22105	4242 aa		5.83	□□□□□ -1.48
FGFR1-238	ENST00000532791	ABCA13	Q86UQ4	5058 aa		5.79	□□□□□ -1.48
FGFR1-238	ENST00000532791	MT1A	P04731	61 aa		5.7	□□□□□ -1.5
FGFR1-238	ENST00000532791	KRTAP19-7	Q3SYF9	63 aa		5.68	□□□□□ -1.5
FGFR1-238	ENST00000532791	SYNE1	Q8NF91	8797 aa	Known RBP	5.67	□□□□□ -1.5
FGFR1-238	ENST00000532791	KRTAP9-6	A0A140TA67	174 aa		5.63	□□□□□ -1.51
FGFR1-238	ENST00000532791	LCE2A	Q5TA79	106 aa	Predicted RBP	5.62	□□□□□ -1.51
FGFR1-238	ENST00000532791	RNF213	Q63HN8	5207 aa		5.57	□□□□□ -1.52
FGFR1-238	ENST00000532791	KRTAP2-3	P0C7H8	128 aa		5.56	□□□□□ -1.52
FGFR1-238	ENST00000532791	KRTAP2-4	Q9BYR9	128 aa		5.56	□□□□□ -1.52
FGFR1-238	ENST00000532791	KRTAP2-1	Q9BYU5	128 aa		5.56	□□□□□ -1.52
FGFR1-238	ENST00000532791	KRTAP4-9	Q9BYQ8	210 aa		5.55	□□□□□ -1.52
FGFR1-238	ENST00000532791	LCE5A	Q5TCM9	118 aa		5.52	□□□□□ -1.53
FGFR1-238	ENST00000532791	FAT4	Q6V0I7	4981 aa		5.52	□□□□□ -1.53
FGFR1-238	ENST00000532791	KRTAP20-1	Q3LI63	56 aa		5.5	□□□□□ -1.53
FGFR1-238	ENST00000532791	FSIP2	Q5CZC0	6907 aa		5.48	□□□□□ -1.53
FGFR1-238	ENST00000532791	UBR4	Q5T4S7	5183 aa		5.46	□□□□□ -1.53
FGFR1-238	ENST00000532791	HMCN2	Q8NDA2	5059 aa		5.41	□□□□□ -1.54
FGFR1-238	ENST00000532791	LCE1A	Q5T7P2	110 aa		5.37	□□□□□ -1.55
FGFR1-238	ENST00000532791	MUC2	Q02817	5179 aa		5.36	□□□□□ -1.55
FGFR1-238	ENST00000532791	KRTAP9-7	A8MTY7	169 aa		5.35	□□□□□ -1.55
FGFR1-238	ENST00000532791	SYNE2	Q8WXH0	6885 aa	Known RBP	5.34	□□□□□ -1.55
FGFR1-238	ENST00000532791	KRTAP6-3	Q3LI67	103 aa		5.32	□□□□□ -1.56
FGFR1-238	ENST00000532791	KRTAP6-1	Q3LI64	71 aa		5.3	□□□□□ -1.56
FGFR1-238	ENST00000532791	KRTAP6-2	Q3LI66	62 aa		5.29	□□□□□ -1.56
FGFR1-238	ENST00000532791	KRTAP9-4	Q9BYQ2	154 aa		5.24	□□□□□ -1.57
FGFR1-238	ENST00000532791	OBSCN	Q5VST9	7968 aa		5.2	□□□□□ -1.58
FGFR1-238	ENST00000532791	LCE4A	Q5TA78	99 aa		5.2	□□□□□ -1.58
FGFR1-238	ENST00000532791	KRTAP9-6	A8MVA2	160 aa		5.15	□□□□□ -1.58
FGFR1-238	ENST00000532791	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.12	□□□□□ -1.59
FGFR1-238	ENST00000532791	KRTAP2-2	Q9BYT5	123 aa		5.08	□□□□□ -1.6
FGFR1-238	ENST00000532791	LCE1C	Q5T751	118 aa		5.06	□□□□□ -1.6
FGFR1-238	ENST00000532791	LCE1E	Q5T753	118 aa		5.06	□□□□□ -1.6
FGFR1-238	ENST00000532791	LCE1F	Q5T754	118 aa		5.06	□□□□□ -1.6
FGFR1-238	ENST00000532791	USH2A	O75445	5202 aa		4.75	□□□□□ -1.65
FGFR1-238	ENST00000532791	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.65	□□□□□ -1.67
FGFR1-238	ENST00000532791	KRTAP9-9	Q9BYP9	154 aa		4.62	□□□□□ -1.67
FGFR1-238	ENST00000532791	DST	Q03001	7570 aa	Known RBP	4.56	□□□□□ -1.68
FGFR1-238	ENST00000532791	MACF1	Q9UPN3	7388 aa	Known RBP	4.45	□□□□□ -1.7
FGFR1-238	ENST00000532791	NEB	P20929	6669 aa		4.45	□□□□□ -1.7
FGFR1-238	ENST00000532791	KRTAP5-9	P26371	169 aa		4.39	□□□□□ -1.71
FGFR1-238	ENST00000532791	KRTAP4-6	Q9BYQ5	205 aa		4.36	□□□□□ -1.71
FGFR1-238	ENST00000532791	KRTAP4-11	Q9BYQ6	195 aa		4.35	□□□□□ -1.71
FGFR1-238	ENST00000532791	KMT2D	O14686	5537 aa		4.31	□□□□□ -1.72
FGFR1-238	ENST00000532791	KRTAP20-2	Q3LI61	65 aa		4.3	□□□□□ -1.72
FGFR1-238	ENST00000532791	SSPO	A2VEC9	5147 aa		4.26	□□□□□ -1.73
FGFR1-238	ENST00000532791	MUC19	Q7Z5P9	8384 aa		4.15	□□□□□ -1.74
FGFR1-238	ENST00000532791	MDN1	Q9NU22	5596 aa		4.09	□□□□□ -1.75
FGFR1-238	ENST00000532791	KRTAP4-4	Q9BYR3	166 aa		4.07	□□□□□ -1.76
FGFR1-238	ENST00000532791	KRTAP4-12	Q9BQ66	201 aa		4.01	□□□□□ -1.77
FGFR1-238	ENST00000532791	KRTAP4-2	Q9BYR5	136 aa		4.01	□□□□□ -1.77
FGFR1-238	ENST00000532791	MUC12	Q9UKN1	5478 aa		4.01	□□□□□ -1.77
FGFR1-238	ENST00000532791	GPR98	Q8WXG9	6306 aa		3.99	□□□□□ -1.77
FGFR1-238	ENST00000532791	KRTAP5-4	Q6L8H1	288 aa		3.97	□□□□□ -1.77
FGFR1-238	ENST00000532791	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.79	□□□□□ -1.8
FGFR1-238	ENST00000532791	MUC5AC	P98088	5654 aa		3.48	□□□□□ -1.85
FGFR1-238	ENST00000532791	KRTAP5-3	Q6L8H2	238 aa		3.46	□□□□□ -1.85
FGFR1-238	ENST00000532791	HMCN1	Q96RW7	5635 aa		3.3	□□□□□ -1.88
FGFR1-238	ENST00000532791	AHNAK2	Q8IVF2	5795 aa		3.3	□□□□□ -1.88
FGFR1-238	ENST00000532791	KRTAP5-8	O75690	187 aa		3.18	□□□□□ -1.9
FGFR1-238	ENST00000532791	KRTAP5-10	Q6L8G5	202 aa		3.07	□□□□□ -1.92
FGFR1-238	ENST00000532791	PHGR1	C9JFL3	82 aa		3.01	□□□□□ -1.93
FGFR1-238	ENST00000532791	KRTAP5-2	Q701N4	177 aa		2.95	□□□□□ -1.94
FGFR1-238	ENST00000532791	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.92	□□□□□ -1.94
FGFR1-238	ENST00000532791	AHNAK	Q09666	5890 aa	Known RBP	2.79	□□□□□ -1.96
FGFR1-238	ENST00000532791	KRTAP5-11	Q6L8G4	156 aa		2.76	□□□□□ -1.97
FGFR1-238	ENST00000532791	KRTAP5-1	Q6L8H4	278 aa		2.75	□□□□□ -1.97
FGFR1-238	ENST00000532791	KRTAP21-2	Q3LI59	83 aa		2.58	□□□□□ -2
FGFR1-238	ENST00000532791	KRTAP21-1	Q3LI58	79 aa		2.36	□□□□□ -2.03
FGFR1-238	ENST00000532791	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.33	□□□□□ -2.04
FGFR1-238	ENST00000532791	KRTAP5-7	Q6L8G8	165 aa		2.1	□□□□□ -2.07
FGFR1-238	ENST00000532791	MUC16	Q8WXI7	14507 aa		1.73	□□□□□ -2.13

Retrieved 77 of 20,778 RNA–protein pairs in 33.1 ms