RNA–Protein interactions for RNA: ENST00000532755.5

CAPRIN1-211, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-211ENST00000532755 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
CAPRIN1-211ENST00000532755 KRTAP19-2Q3LHN2 52 aa2.18□□□□□ -2.06
CAPRIN1-211ENST00000532755 TNP1P09430 55 aa2.17□□□□□ -2.06
CAPRIN1-211ENST00000532755 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
CAPRIN1-211ENST00000532755 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.07
CAPRIN1-211ENST00000532755 HERC2O95714 4834 aa2.15□□□□□ -2.07
CAPRIN1-211ENST00000532755 BIRC6Q9NR09 4857 aa2.15□□□□□ -2.07
CAPRIN1-211ENST00000532755 PLAC4Q8WY50 150 aa2.13□□□□□ -2.07
CAPRIN1-211ENST00000532755 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
CAPRIN1-211ENST00000532755 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
CAPRIN1-211ENST00000532755 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
CAPRIN1-211ENST00000532755 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
CAPRIN1-211ENST00000532755 HERC1Q15751 4861 aa2.09□□□□□ -2.08
CAPRIN1-211ENST00000532755 KRTAP19-8Q3LI54 63 aa2.03□□□□□ -2.08
CAPRIN1-211ENST00000532755 M0R2T5 61 aa2.02□□□□□ -2.09
CAPRIN1-211ENST00000532755 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
CAPRIN1-211ENST00000532755 HMCN2Q8NDA2 5059 aa2.02□□□□□ -2.09
CAPRIN1-211ENST00000532755 PRO2289Q9P1D8 64 aa2.01□□□□□ -2.09
CAPRIN1-211ENST00000532755 MT1HP80294 61 aa2□□□□□ -2.09
CAPRIN1-211ENST00000532755 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
CAPRIN1-211ENST00000532755 MUC2Q02817 5179 aa1.99□□□□□ -2.09
CAPRIN1-211ENST00000532755 MT2AP02795 61 aa1.95□□□□□ -2.1
CAPRIN1-211ENST00000532755 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
CAPRIN1-211ENST00000532755 MT1FP04733 61 aa1.92□□□□□ -2.1
CAPRIN1-211ENST00000532755 INE1O15225 51 aa1.9□□□□□ -2.11
CAPRIN1-211ENST00000532755 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
CAPRIN1-211ENST00000532755 MT1BP07438 61 aa1.89□□□□□ -2.11
CAPRIN1-211ENST00000532755 MT1XP80297 61 aa1.88□□□□□ -2.11
CAPRIN1-211ENST00000532755 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
CAPRIN1-211ENST00000532755 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
CAPRIN1-211ENST00000532755 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
CAPRIN1-211ENST00000532755 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CAPRIN1-211ENST00000532755 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
CAPRIN1-211ENST00000532755 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
CAPRIN1-211ENST00000532755 MT1EP04732 61 aa1.69□□□□□ -2.14
CAPRIN1-211ENST00000532755 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
CAPRIN1-211ENST00000532755 KRTAP2-3P0C7H8 128 aa1.67□□□□□ -2.14
CAPRIN1-211ENST00000532755 MT1LQ93083 61 aa1.67□□□□□ -2.14
CAPRIN1-211ENST00000532755 KRTAP2-4Q9BYR9 128 aa1.67□□□□□ -2.14
CAPRIN1-211ENST00000532755 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
CAPRIN1-211ENST00000532755 MT1GP13640 62 aa1.65□□□□□ -2.15
CAPRIN1-211ENST00000532755 SSPOA2VEC9 5147 aa1.6□□□□□ -2.15
CAPRIN1-211ENST00000532755 USH2AO75445 5202 aa1.6□□□□□ -2.15
CAPRIN1-211ENST00000532755 KRTAP19-3Q7Z4W3 81 aa1.59□□□□□ -2.15
CAPRIN1-211ENST00000532755 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
CAPRIN1-211ENST00000532755 MT1MQ8N339 61 aa1.54□□□□□ -2.16
CAPRIN1-211ENST00000532755 MT1AP04731 61 aa1.52□□□□□ -2.17
CAPRIN1-211ENST00000532755 KMT2DO14686 5537 aa1.52□□□□□ -2.17
CAPRIN1-211ENST00000532755 SPRR2FQ96RM1 72 aa1.46□□□□□ -2.18
CAPRIN1-211ENST00000532755 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
CAPRIN1-211ENST00000532755 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
CAPRIN1-211ENST00000532755 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
CAPRIN1-211ENST00000532755 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
CAPRIN1-211ENST00000532755 SPRR2EP22531 72 aa1.33□□□□□ -2.2
CAPRIN1-211ENST00000532755 SPRR2BP35325 72 aa1.33□□□□□ -2.2
CAPRIN1-211ENST00000532755 SPRR2AP35326 72 aa1.33□□□□□ -2.2
CAPRIN1-211ENST00000532755 SYNE1Q8NF91 8797 aaKnown RBP1.33□□□□□ -2.2
CAPRIN1-211ENST00000532755 SPRR2DP22532 72 aa1.3□□□□□ -2.2
CAPRIN1-211ENST00000532755 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
CAPRIN1-211ENST00000532755 FSIP2Q5CZC0 6907 aa1.28□□□□□ -2.2
CAPRIN1-211ENST00000532755 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
CAPRIN1-211ENST00000532755 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
CAPRIN1-211ENST00000532755 PRM1P04553 51 aa1.21□□□□□ -2.22
CAPRIN1-211ENST00000532755 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
CAPRIN1-211ENST00000532755 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
CAPRIN1-211ENST00000532755 KRTAP20-1Q3LI63 56 aa1.15□□□□□ -2.23
CAPRIN1-211ENST00000532755 KRTAP20-2Q3LI61 65 aa1.14□□□□□ -2.23
CAPRIN1-211ENST00000532755 NEBP20929 6669 aa1.08□□□□□ -2.24
CAPRIN1-211ENST00000532755 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
CAPRIN1-211ENST00000532755 MT4P47944 62 aa1.03□□□□□ -2.24
CAPRIN1-211ENST00000532755 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
CAPRIN1-211ENST00000532755 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
CAPRIN1-211ENST00000532755 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
CAPRIN1-211ENST00000532755 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
CAPRIN1-211ENST00000532755 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
CAPRIN1-211ENST00000532755 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.28
CAPRIN1-211ENST00000532755 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
CAPRIN1-211ENST00000532755 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 100 ms