RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
FAM49B-218ENST00000520887 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
FAM49B-218ENST00000520887 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
FAM49B-218ENST00000520887 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
FAM49B-218ENST00000520887 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
FAM49B-218ENST00000520887 RPS28P62857 69 aaKnown RBP2.49□□□□□ -2.01
FAM49B-218ENST00000520887 Q1T7F1 81 aa2.49□□□□□ -2.01
FAM49B-218ENST00000520887 PSPHP1O15172 72 aa2.48□□□□□ -2.01
FAM49B-218ENST00000520887 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
FAM49B-218ENST00000520887 A6NED7 52 aa2.47□□□□□ -2.01
FAM49B-218ENST00000520887 KRTAP13-4Q3LI77 160 aa2.47□□□□□ -2.01
FAM49B-218ENST00000520887 USH2AO75445 5202 aa2.44□□□□□ -2.02
FAM49B-218ENST00000520887 MT1XP80297 61 aa2.43□□□□□ -2.02
FAM49B-218ENST00000520887 KRTAP12-1P59990 96 aa2.42□□□□□ -2.02
FAM49B-218ENST00000520887 SSPOA2VEC9 5147 aa2.42□□□□□ -2.02
FAM49B-218ENST00000520887 TNP1P09430 55 aa2.39□□□□□ -2.03
FAM49B-218ENST00000520887 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
FAM49B-218ENST00000520887 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
FAM49B-218ENST00000520887 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
FAM49B-218ENST00000520887 MACF1Q9UPN3 7388 aaKnown RBP2.36□□□□□ -2.03
FAM49B-218ENST00000520887 CDC42SE1Q9NRR8 79 aa2.35□□□□□ -2.03
FAM49B-218ENST00000520887 SPRR2FQ96RM1 72 aa2.33□□□□□ -2.04
FAM49B-218ENST00000520887 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
FAM49B-218ENST00000520887 PP632Q6XCG6 107 aa2.31□□□□□ -2.04
FAM49B-218ENST00000520887 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
FAM49B-218ENST00000520887 BRK1Q8WUW1 75 aa2.29□□□□□ -2.04
FAM49B-218ENST00000520887 SPRR2EP22531 72 aa2.27□□□□□ -2.05
FAM49B-218ENST00000520887 SPRR2BP35325 72 aa2.27□□□□□ -2.05
FAM49B-218ENST00000520887 SPRR2AP35326 72 aa2.27□□□□□ -2.05
FAM49B-218ENST00000520887 ROMO1P60602 79 aa2.27□□□□□ -2.05
FAM49B-218ENST00000520887 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
FAM49B-218ENST00000520887 SYNE2Q8WXH0 6885 aaKnown RBP2.25□□□□□ -2.05
FAM49B-218ENST00000520887 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
FAM49B-218ENST00000520887 SPRR2DP22532 72 aa2.2□□□□□ -2.06
FAM49B-218ENST00000520887 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
FAM49B-218ENST00000520887 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
FAM49B-218ENST00000520887 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
FAM49B-218ENST00000520887 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
FAM49B-218ENST00000520887 MT1EP04732 61 aa2.16□□□□□ -2.06
FAM49B-218ENST00000520887 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
FAM49B-218ENST00000520887 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
FAM49B-218ENST00000520887 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
FAM49B-218ENST00000520887 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
FAM49B-218ENST00000520887 MT1GP13640 62 aa2.14□□□□□ -2.07
FAM49B-218ENST00000520887 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
FAM49B-218ENST00000520887 KMT2DO14686 5537 aa2.14□□□□□ -2.07
FAM49B-218ENST00000520887 NEBP20929 6669 aa2.12□□□□□ -2.07
FAM49B-218ENST00000520887 PRO0628Q9UI54 55 aa2.11□□□□□ -2.07
FAM49B-218ENST00000520887 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
FAM49B-218ENST00000520887 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
FAM49B-218ENST00000520887 MT1LQ93083 61 aa2.09□□□□□ -2.07
FAM49B-218ENST00000520887 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
FAM49B-218ENST00000520887 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
FAM49B-218ENST00000520887 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
FAM49B-218ENST00000520887 MT1MQ8N339 61 aa2.05□□□□□ -2.08
FAM49B-218ENST00000520887 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
FAM49B-218ENST00000520887 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
FAM49B-218ENST00000520887 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
FAM49B-218ENST00000520887 MT4P47944 62 aa1.88□□□□□ -2.11
FAM49B-218ENST00000520887 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
FAM49B-218ENST00000520887 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
FAM49B-218ENST00000520887 MT1AP04731 61 aa1.81□□□□□ -2.12
FAM49B-218ENST00000520887 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
FAM49B-218ENST00000520887 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
FAM49B-218ENST00000520887 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
FAM49B-218ENST00000520887 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
FAM49B-218ENST00000520887 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
FAM49B-218ENST00000520887 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
FAM49B-218ENST00000520887 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
FAM49B-218ENST00000520887 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.16
FAM49B-218ENST00000520887 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
FAM49B-218ENST00000520887 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
FAM49B-218ENST00000520887 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
FAM49B-218ENST00000520887 INE1O15225 51 aa1.29□□□□□ -2.2
FAM49B-218ENST00000520887 PRM1P04553 51 aa1.14□□□□□ -2.23
FAM49B-218ENST00000520887 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
FAM49B-218ENST00000520887 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
FAM49B-218ENST00000520887 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 42.2 ms