RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 RYR3Q15413 4870 aa0.71□□□□□ -2.3
RNU1-40P-201ENST00000516816 MT1GP13640 62 aa0.71□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP5-11Q6L8G4 156 aa0.71□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
RNU1-40P-201ENST00000516816 HERC1Q15751 4861 aa0.69□□□□□ -2.3
RNU1-40P-201ENST00000516816 HMCN2Q8NDA2 5059 aa0.69□□□□□ -2.3
RNU1-40P-201ENST00000516816 ABCA13Q86UQ4 5058 aa0.68□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP12-4P60329 112 aa0.68□□□□□ -2.3
RNU1-40P-201ENST00000516816 LCE1FQ5T754 118 aa0.68□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.68□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP19-6Q3LI70 58 aa0.67□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
RNU1-40P-201ENST00000516816 BIRC6Q9NR09 4857 aa0.67□□□□□ -2.3
RNU1-40P-201ENST00000516816 MT1AP04731 61 aa0.66□□□□□ -2.3
RNU1-40P-201ENST00000516816 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
RNU1-40P-201ENST00000516816 MT1MQ8N339 61 aa0.66□□□□□ -2.3
RNU1-40P-201ENST00000516816 CRCT1Q9UGL9 99 aa0.65□□□□□ -2.31
RNU1-40P-201ENST00000516816 HERC2O95714 4834 aa0.64□□□□□ -2.31
RNU1-40P-201ENST00000516816 EPPK1P58107 5090 aaKnown RBP0.64□□□□□ -2.31
RNU1-40P-201ENST00000516816 KRTAP9-6A8MVA2 160 aa0.64□□□□□ -2.31
RNU1-40P-201ENST00000516816 LCE3EQ5T5B0 92 aa0.64□□□□□ -2.31
RNU1-40P-201ENST00000516816 LCE3DQ9BYE3 92 aa0.64□□□□□ -2.31
RNU1-40P-201ENST00000516816 SPRR2FQ96RM1 72 aa0.63□□□□□ -2.31
RNU1-40P-201ENST00000516816 MUC2Q02817 5179 aa0.61□□□□□ -2.31
RNU1-40P-201ENST00000516816 KRTAP6-3Q3LI67 103 aa0.61□□□□□ -2.31
RNU1-40P-201ENST00000516816 PCLOQ9Y6V0 5065 aa0.61□□□□□ -2.31
RNU1-40P-201ENST00000516816 FAT4Q6V0I7 4981 aa0.59□□□□□ -2.31
RNU1-40P-201ENST00000516816 KRTAP5-1Q6L8H4 278 aa0.59□□□□□ -2.31
RNU1-40P-201ENST00000516816 KRTAP4-3Q9BYR4 195 aa0.59□□□□□ -2.31
RNU1-40P-201ENST00000516816 SPRR2EP22531 72 aa0.58□□□□□ -2.32
RNU1-40P-201ENST00000516816 SPRR2BP35325 72 aa0.58□□□□□ -2.32
RNU1-40P-201ENST00000516816 SPRR2AP35326 72 aa0.58□□□□□ -2.32
RNU1-40P-201ENST00000516816 KRTAP4-4Q9BYR3 166 aa0.58□□□□□ -2.32
RNU1-40P-201ENST00000516816 UBR4Q5T4S7 5183 aa0.58□□□□□ -2.32
RNU1-40P-201ENST00000516816 PRM1P04553 51 aa0.57□□□□□ -2.32
RNU1-40P-201ENST00000516816 SPRR2DP22532 72 aa0.57□□□□□ -2.32
RNU1-40P-201ENST00000516816 KRTAP5-9P26371 169 aa0.56□□□□□ -2.32
RNU1-40P-201ENST00000516816 KRTAP6-1Q3LI64 71 aa0.56□□□□□ -2.32
RNU1-40P-201ENST00000516816 KRTAP5-4Q6L8H1 288 aa0.56□□□□□ -2.32
RNU1-40P-201ENST00000516816 RNF213Q63HN8 5207 aa0.56□□□□□ -2.32
RNU1-40P-201ENST00000516816 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
RNU1-40P-201ENST00000516816 LCE1CQ5T751 118 aa0.52□□□□□ -2.33
RNU1-40P-201ENST00000516816 LCE1BQ5T7P3 118 aa0.52□□□□□ -2.33
RNU1-40P-201ENST00000516816 KRTAP5-5Q701N2 237 aaPredicted RBP0.52□□□□□ -2.33
RNU1-40P-201ENST00000516816 OBSCNQ5VST9 7968 aa0.5□□□□□ -2.33
RNU1-40P-201ENST00000516816 KMT2DO14686 5537 aa0.5□□□□□ -2.33
RNU1-40P-201ENST00000516816 SSPOA2VEC9 5147 aa0.5□□□□□ -2.33
RNU1-40P-201ENST00000516816 USH2AO75445 5202 aa0.49□□□□□ -2.33
RNU1-40P-201ENST00000516816 KRTAP5-2Q701N4 177 aa0.49□□□□□ -2.33
RNU1-40P-201ENST00000516816 MT4P47944 62 aa0.47□□□□□ -2.33
RNU1-40P-201ENST00000516816 GPR98Q8WXG9 6306 aa0.46□□□□□ -2.34
RNU1-40P-201ENST00000516816 KRTAP20-1Q3LI63 56 aa0.45□□□□□ -2.34
RNU1-40P-201ENST00000516816 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
RNU1-40P-201ENST00000516816 KRTAP20-2Q3LI61 65 aa0.44□□□□□ -2.34
RNU1-40P-201ENST00000516816 FCGBPQ9Y6R7 5405 aaPredicted RBP0.44□□□□□ -2.34
RNU1-40P-201ENST00000516816 DSTQ03001 7570 aaKnown RBP0.42□□□□□ -2.34
RNU1-40P-201ENST00000516816 MUC12Q9UKN1 5478 aa0.41□□□□□ -2.34
RNU1-40P-201ENST00000516816 FSIP2Q5CZC0 6907 aa0.41□□□□□ -2.34
RNU1-40P-201ENST00000516816 KRTAP5-8O75690 187 aa0.41□□□□□ -2.34
RNU1-40P-201ENST00000516816 SYNE2Q8WXH0 6885 aaKnown RBP0.4□□□□□ -2.35
RNU1-40P-201ENST00000516816 KRTAP5-10Q6L8G5 202 aa0.4□□□□□ -2.35
RNU1-40P-201ENST00000516816 MACF1Q9UPN3 7388 aaKnown RBP0.39□□□□□ -2.35
RNU1-40P-201ENST00000516816 KRTAP5-7Q6L8G8 165 aa0.38□□□□□ -2.35
RNU1-40P-201ENST00000516816 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
RNU1-40P-201ENST00000516816 KRTAP21-2Q3LI59 83 aa0.36□□□□□ -2.35
RNU1-40P-201ENST00000516816 HMCN1Q96RW7 5635 aa0.35□□□□□ -2.35
RNU1-40P-201ENST00000516816 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
RNU1-40P-201ENST00000516816 AHNAKQ09666 5890 aaKnown RBP0.35□□□□□ -2.35
RNU1-40P-201ENST00000516816 MUC19Q7Z5P9 8384 aa0.34□□□□□ -2.35
RNU1-40P-201ENST00000516816 MUC5BQ9HC84 5762 aaPredicted RBP0.32□□□□□ -2.36
RNU1-40P-201ENST00000516816 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
RNU1-40P-201ENST00000516816 AHNAK2Q8IVF2 5795 aa0.29□□□□□ -2.36
RNU1-40P-201ENST00000516816 PHGR1C9JFL3 82 aa0.29□□□□□ -2.36
RNU1-40P-201ENST00000516816 NEBP20929 6669 aa0.28□□□□□ -2.36
RNU1-40P-201ENST00000516816 MUC16Q8WXI7 14507 aa0.17□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms