RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 CHKB-CPT1BH3BT56 60 aa2.69□□□□□ -1.98
RFC1-215ENST00000512881 SMIM20Q8N5G0 67 aa2.69□□□□□ -1.98
RFC1-215ENST00000512881 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
RFC1-215ENST00000512881 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
RFC1-215ENST00000512881 K7ERU9 68 aa2.63□□□□□ -1.99
RFC1-215ENST00000512881 KRTAP13-4Q3LI77 160 aa2.63□□□□□ -1.99
RFC1-215ENST00000512881 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
RFC1-215ENST00000512881 SPANXA2-OT1Q8N9U9 137 aa2.62□□□□□ -1.99
RFC1-215ENST00000512881 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
RFC1-215ENST00000512881 SERP2Q8N6R1 65 aa2.58□□□□□ -2
RFC1-215ENST00000512881 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
RFC1-215ENST00000512881 A0A0D9SG42 100 aa2.56□□□□□ -2
RFC1-215ENST00000512881 MT1EP04732 61 aa2.56□□□□□ -2
RFC1-215ENST00000512881 KRTAP5-8O75690 187 aa2.55□□□□□ -2
RFC1-215ENST00000512881 SEC61GP60059 68 aa2.55□□□□□ -2
RFC1-215ENST00000512881 COA5Q86WW8 74 aa2.55□□□□□ -2
RFC1-215ENST00000512881 SERP1Q9Y6X1 66 aa2.55□□□□□ -2
RFC1-215ENST00000512881 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
RFC1-215ENST00000512881 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
RFC1-215ENST00000512881 SPINT4Q6UDR6 99 aa2.52□□□□□ -2.01
RFC1-215ENST00000512881 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
RFC1-215ENST00000512881 A0A1B0GU33 70 aa2.51□□□□□ -2.01
RFC1-215ENST00000512881 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
RFC1-215ENST00000512881 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
RFC1-215ENST00000512881 MT1GP13640 62 aa2.48□□□□□ -2.01
RFC1-215ENST00000512881 CYSTM1Q9H1C7 97 aa2.48□□□□□ -2.01
RFC1-215ENST00000512881 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
RFC1-215ENST00000512881 COX7CP15954 63 aa2.47□□□□□ -2.01
RFC1-215ENST00000512881 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
RFC1-215ENST00000512881 H7BZZ5 65 aa2.45□□□□□ -2.02
RFC1-215ENST00000512881 SMIM26A0A096LP01 95 aa2.44□□□□□ -2.02
RFC1-215ENST00000512881 A0A1B0GU69 56 aa2.43□□□□□ -2.02
RFC1-215ENST00000512881 MT1MQ8N339 61 aa2.43□□□□□ -2.02
RFC1-215ENST00000512881 MT1LQ93083 61 aa2.43□□□□□ -2.02
RFC1-215ENST00000512881 MT4P47944 62 aa2.4□□□□□ -2.03
RFC1-215ENST00000512881 C10orf95Q9H7T3 257 aa2.4□□□□□ -2.03
RFC1-215ENST00000512881 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
RFC1-215ENST00000512881 TNP1P09430 55 aa2.39□□□□□ -2.03
RFC1-215ENST00000512881 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
RFC1-215ENST00000512881 ANAPC13Q9BS18 74 aa2.34□□□□□ -2.03
RFC1-215ENST00000512881 PRR15LQ9BU68 103 aa2.34□□□□□ -2.03
RFC1-215ENST00000512881 CCDC179H3BU77 68 aa2.31□□□□□ -2.04
RFC1-215ENST00000512881 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
RFC1-215ENST00000512881 LINC01558Q9Y6Z2 57 aa2.3□□□□□ -2.04
RFC1-215ENST00000512881 ATP5EP56381 51 aaPredicted RBP2.29□□□□□ -2.04
RFC1-215ENST00000512881 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
RFC1-215ENST00000512881 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
RFC1-215ENST00000512881 UQCR11O14957 56 aa2.26□□□□□ -2.05
RFC1-215ENST00000512881 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
RFC1-215ENST00000512881 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
RFC1-215ENST00000512881 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
RFC1-215ENST00000512881 TMEM258P61165 79 aa2.2□□□□□ -2.06
RFC1-215ENST00000512881 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
RFC1-215ENST00000512881 K7ERS5 55 aa2.17□□□□□ -2.06
RFC1-215ENST00000512881 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
RFC1-215ENST00000512881 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
RFC1-215ENST00000512881 PSPHP1O15172 72 aa2.12□□□□□ -2.07
RFC1-215ENST00000512881 V9GYY9 64 aa2.11□□□□□ -2.07
RFC1-215ENST00000512881 Q1T7F1 81 aa2.1□□□□□ -2.07
RFC1-215ENST00000512881 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
RFC1-215ENST00000512881 MT1AP04731 61 aa2.06□□□□□ -2.08
RFC1-215ENST00000512881 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
RFC1-215ENST00000512881 A6NED7 52 aa2.04□□□□□ -2.08
RFC1-215ENST00000512881 CDC42SE1Q9NRR8 79 aa2.04□□□□□ -2.08
RFC1-215ENST00000512881 ROMO1P60602 79 aa2.02□□□□□ -2.09
RFC1-215ENST00000512881 RPS28P62857 69 aaKnown RBP2.02□□□□□ -2.09
RFC1-215ENST00000512881 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
RFC1-215ENST00000512881 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
RFC1-215ENST00000512881 BRK1Q8WUW1 75 aa1.66□□□□□ -2.14
RFC1-215ENST00000512881 PMAIP1Q13794 54 aa1.56□□□□□ -2.16
RFC1-215ENST00000512881 PRO0628Q9UI54 55 aa1.35□□□□□ -2.19
RFC1-215ENST00000512881 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
RFC1-215ENST00000512881 KTN1-AS1Q86SY8 53 aa1.31□□□□□ -2.2
RFC1-215ENST00000512881 LUZP6Q538Z0 58 aa1.3□□□□□ -2.2
RFC1-215ENST00000512881 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
RFC1-215ENST00000512881 PRM1P04553 51 aa1.02□□□□□ -2.25
RFC1-215ENST00000512881 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
RFC1-215ENST00000512881 INE1O15225 51 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms