RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-238ENST00000512620 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
CAST-238ENST00000512620 DNHD1Q96M86 4753 aa1.34□□□□□ -2.19
CAST-238ENST00000512620 KRTAP21-3Q3LHN1 58 aa1.34□□□□□ -2.19
CAST-238ENST00000512620 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
CAST-238ENST00000512620 RYR2Q92736 4967 aa1.31□□□□□ -2.2
CAST-238ENST00000512620 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
CAST-238ENST00000512620 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
CAST-238ENST00000512620 KRTAP8-1Q8IUC2 63 aa1.3□□□□□ -2.2
CAST-238ENST00000512620 SPRR2GQ9BYE4 73 aa1.3□□□□□ -2.2
CAST-238ENST00000512620 LRP2P98164 4655 aa1.3□□□□□ -2.2
CAST-238ENST00000512620 HERC1Q15751 4861 aa1.29□□□□□ -2.2
CAST-238ENST00000512620 RYR1P21817 5038 aa1.29□□□□□ -2.2
CAST-238ENST00000512620 KMT2CQ8NEZ4 4911 aaKnown RBP1.28□□□□□ -2.2
CAST-238ENST00000512620 LPAP08519 4548 aa1.27□□□□□ -2.21
CAST-238ENST00000512620 KRTAP19-8Q3LI54 63 aa1.24□□□□□ -2.21
CAST-238ENST00000512620 KIAA1109Q2LD37 5005 aa1.23□□□□□ -2.21
CAST-238ENST00000512620 MT1XP80297 61 aa1.22□□□□□ -2.21
CAST-238ENST00000512620 ABCA13Q86UQ4 5058 aa1.22□□□□□ -2.21
CAST-238ENST00000512620 RYR3Q15413 4870 aa1.21□□□□□ -2.22
CAST-238ENST00000512620 MT2AP02795 61 aa1.21□□□□□ -2.22
CAST-238ENST00000512620 MT1FP04733 61 aa1.21□□□□□ -2.22
CAST-238ENST00000512620 M0R2T5 61 aa1.2□□□□□ -2.22
CAST-238ENST00000512620 MT1BP07438 61 aa1.2□□□□□ -2.22
CAST-238ENST00000512620 MT1HP80294 61 aa1.19□□□□□ -2.22
CAST-238ENST00000512620 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
CAST-238ENST00000512620 KRTAP19-5Q3LI72 72 aa1.17□□□□□ -2.22
CAST-238ENST00000512620 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
CAST-238ENST00000512620 KRTAP2-1Q9BYU5 128 aa1.17□□□□□ -2.22
CAST-238ENST00000512620 BIRC6Q9NR09 4857 aa1.16□□□□□ -2.22
CAST-238ENST00000512620 HMCN2Q8NDA2 5059 aa1.16□□□□□ -2.22
CAST-238ENST00000512620 CRCT1Q9UGL9 99 aa1.14□□□□□ -2.23
CAST-238ENST00000512620 PCLOQ9Y6V0 5065 aa1.12□□□□□ -2.23
CAST-238ENST00000512620 MUC2Q02817 5179 aa1.12□□□□□ -2.23
CAST-238ENST00000512620 EPPK1P58107 5090 aaKnown RBP1.11□□□□□ -2.23
CAST-238ENST00000512620 HERC2O95714 4834 aa1.1□□□□□ -2.23
CAST-238ENST00000512620 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
CAST-238ENST00000512620 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
CAST-238ENST00000512620 MT1LQ93083 61 aa1.06□□□□□ -2.24
CAST-238ENST00000512620 MT1EP04732 61 aa1.04□□□□□ -2.24
CAST-238ENST00000512620 RNF213Q63HN8 5207 aa1.03□□□□□ -2.24
CAST-238ENST00000512620 FAT4Q6V0I7 4981 aa1□□□□□ -2.25
CAST-238ENST00000512620 MT1GP13640 62 aa0.99□□□□□ -2.25
CAST-238ENST00000512620 FCGBPQ9Y6R7 5405 aaPredicted RBP0.98□□□□□ -2.25
CAST-238ENST00000512620 MT1AP04731 61 aa0.97□□□□□ -2.25
CAST-238ENST00000512620 MT1MQ8N339 61 aa0.97□□□□□ -2.25
CAST-238ENST00000512620 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
CAST-238ENST00000512620 PRM1P04553 51 aa0.94□□□□□ -2.26
CAST-238ENST00000512620 KRTAP19-6Q3LI70 58 aa0.93□□□□□ -2.26
CAST-238ENST00000512620 KMT2DO14686 5537 aa0.91□□□□□ -2.26
CAST-238ENST00000512620 USH2AO75445 5202 aa0.91□□□□□ -2.26
CAST-238ENST00000512620 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
CAST-238ENST00000512620 SSPOA2VEC9 5147 aa0.89□□□□□ -2.27
CAST-238ENST00000512620 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
CAST-238ENST00000512620 KRTAP6-2Q3LI66 62 aa0.87□□□□□ -2.27
CAST-238ENST00000512620 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
CAST-238ENST00000512620 SPRR2AP35326 72 aa0.82□□□□□ -2.28
CAST-238ENST00000512620 SPRR2EP22531 72 aa0.8□□□□□ -2.28
CAST-238ENST00000512620 SPRR2BP35325 72 aa0.79□□□□□ -2.28
CAST-238ENST00000512620 MUC12Q9UKN1 5478 aa0.78□□□□□ -2.28
CAST-238ENST00000512620 SPRR2DP22532 72 aa0.76□□□□□ -2.29
CAST-238ENST00000512620 SYNE2Q8WXH0 6885 aaKnown RBP0.7□□□□□ -2.3
CAST-238ENST00000512620 DSTQ03001 7570 aaKnown RBP0.7□□□□□ -2.3
CAST-238ENST00000512620 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
CAST-238ENST00000512620 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
CAST-238ENST00000512620 FSIP2Q5CZC0 6907 aa0.65□□□□□ -2.31
CAST-238ENST00000512620 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
CAST-238ENST00000512620 MACF1Q9UPN3 7388 aaKnown RBP0.65□□□□□ -2.31
CAST-238ENST00000512620 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
CAST-238ENST00000512620 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
CAST-238ENST00000512620 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
CAST-238ENST00000512620 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
CAST-238ENST00000512620 MT4P47944 62 aa0.61□□□□□ -2.31
CAST-238ENST00000512620 KRTAP20-1Q3LI63 56 aa0.57□□□□□ -2.32
CAST-238ENST00000512620 NEBP20929 6669 aa0.54□□□□□ -2.32
CAST-238ENST00000512620 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
CAST-238ENST00000512620 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
CAST-238ENST00000512620 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
CAST-238ENST00000512620 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 107.9 ms