RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 LCE4AQ5TA78 99 aa1.62□□□□□ -2.15
PTPN13-209ENST00000511467 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.16
PTPN13-209ENST00000511467 MUC17Q685J3 4493 aa1.57□□□□□ -2.16
PTPN13-209ENST00000511467 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
PTPN13-209ENST00000511467 LCE2AQ5TA79 106 aaPredicted RBP1.56□□□□□ -2.16
PTPN13-209ENST00000511467 LCE3BQ5TA77 95 aa1.54□□□□□ -2.16
PTPN13-209ENST00000511467 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
PTPN13-209ENST00000511467 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
PTPN13-209ENST00000511467 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
PTPN13-209ENST00000511467 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
PTPN13-209ENST00000511467 KRTAP9-2Q9BYQ4 174 aa1.49□□□□□ -2.17
PTPN13-209ENST00000511467 LCE5AQ5TCM9 118 aa1.47□□□□□ -2.17
PTPN13-209ENST00000511467 MUC2Q02817 5179 aa1.46□□□□□ -2.18
PTPN13-209ENST00000511467 KRTAP9-6A0A140TA67 174 aa1.46□□□□□ -2.18
PTPN13-209ENST00000511467 KRTAP20-1Q3LI63 56 aa1.46□□□□□ -2.18
PTPN13-209ENST00000511467 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
PTPN13-209ENST00000511467 KRTAP2-2Q9BYT5 123 aa1.44□□□□□ -2.18
PTPN13-209ENST00000511467 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
PTPN13-209ENST00000511467 KRTAP5-9P26371 169 aa1.41□□□□□ -2.18
PTPN13-209ENST00000511467 KMT2DO14686 5537 aa1.38□□□□□ -2.19
PTPN13-209ENST00000511467 KRTAP9-4Q9BYQ2 154 aa1.38□□□□□ -2.19
PTPN13-209ENST00000511467 LRP2P98164 4655 aa1.38□□□□□ -2.19
PTPN13-209ENST00000511467 KRTAP9-7A8MTY7 169 aa1.36□□□□□ -2.19
PTPN13-209ENST00000511467 MDN1Q9NU22 5596 aa1.34□□□□□ -2.19
PTPN13-209ENST00000511467 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
PTPN13-209ENST00000511467 KRTAP4-8A0A0G2JLE6 195 aa1.33□□□□□ -2.2
PTPN13-209ENST00000511467 KRTAP4-8Q9BYQ9 185 aa1.33□□□□□ -2.2
PTPN13-209ENST00000511467 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.33□□□□□ -2.2
PTPN13-209ENST00000511467 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
PTPN13-209ENST00000511467 LCE1EQ5T753 118 aa1.3□□□□□ -2.2
PTPN13-209ENST00000511467 NEBP20929 6669 aa1.3□□□□□ -2.2
PTPN13-209ENST00000511467 KRTAP9-9Q9BYP9 154 aa1.29□□□□□ -2.2
PTPN13-209ENST00000511467 PRM1P04553 51 aa1.28□□□□□ -2.2
PTPN13-209ENST00000511467 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
PTPN13-209ENST00000511467 OBSCNQ5VST9 7968 aa1.28□□□□□ -2.2
PTPN13-209ENST00000511467 MT4P47944 62 aa1.26□□□□□ -2.21
PTPN13-209ENST00000511467 LCE1DQ5T752 114 aa1.25□□□□□ -2.21
PTPN13-209ENST00000511467 KRTAP5-4Q6L8H1 288 aa1.24□□□□□ -2.21
PTPN13-209ENST00000511467 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
PTPN13-209ENST00000511467 SYNE1Q8NF91 8797 aaKnown RBP1.23□□□□□ -2.21
PTPN13-209ENST00000511467 LOC100996750A0A140TA64 210 aa1.23□□□□□ -2.21
PTPN13-209ENST00000511467 KRTAP4-6Q9BYQ5 205 aa1.23□□□□□ -2.21
PTPN13-209ENST00000511467 LPAP08519 4548 aa1.23□□□□□ -2.21
PTPN13-209ENST00000511467 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
PTPN13-209ENST00000511467 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
PTPN13-209ENST00000511467 LCE1BQ5T7P3 118 aa1.2□□□□□ -2.22
PTPN13-209ENST00000511467 KRTAP9-6A8MVA2 160 aa1.19□□□□□ -2.22
PTPN13-209ENST00000511467 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
PTPN13-209ENST00000511467 MACF1Q9UPN3 7388 aaKnown RBP1.15□□□□□ -2.23
PTPN13-209ENST00000511467 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
PTPN13-209ENST00000511467 KRTAP20-2Q3LI61 65 aa1.12□□□□□ -2.23
PTPN13-209ENST00000511467 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
PTPN13-209ENST00000511467 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
PTPN13-209ENST00000511467 KRTAP5-5Q701N2 237 aaPredicted RBP1.11□□□□□ -2.23
PTPN13-209ENST00000511467 KRTAP4-7Q9BYR0 210 aa1.11□□□□□ -2.23
PTPN13-209ENST00000511467 LCE1FQ5T754 118 aa1.1□□□□□ -2.23
PTPN13-209ENST00000511467 MUC5ACP98088 5654 aa1.09□□□□□ -2.23
PTPN13-209ENST00000511467 KRTAP5-3Q6L8H2 238 aa1.09□□□□□ -2.24
PTPN13-209ENST00000511467 KRTAP4-3Q9BYR4 195 aa1.06□□□□□ -2.24
PTPN13-209ENST00000511467 KRTAP4-11Q9BYQ6 195 aa1.05□□□□□ -2.24
PTPN13-209ENST00000511467 KRTAP5-2Q701N4 177 aa1.02□□□□□ -2.25
PTPN13-209ENST00000511467 KRTAP5-8O75690 187 aa1.01□□□□□ -2.25
PTPN13-209ENST00000511467 SYNE2Q8WXH0 6885 aaKnown RBP0.99□□□□□ -2.25
PTPN13-209ENST00000511467 FSIP2Q5CZC0 6907 aa0.99□□□□□ -2.25
PTPN13-209ENST00000511467 KRTAP4-2Q9BYR5 136 aa0.97□□□□□ -2.25
PTPN13-209ENST00000511467 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.97□□□□□ -2.25
PTPN13-209ENST00000511467 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
PTPN13-209ENST00000511467 KRTAP4-9Q9BYQ8 210 aa0.94□□□□□ -2.26
PTPN13-209ENST00000511467 KRTAP5-1Q6L8H4 278 aa0.9□□□□□ -2.27
PTPN13-209ENST00000511467 KRTAP4-12Q9BQ66 201 aa0.9□□□□□ -2.27
PTPN13-209ENST00000511467 KRTAP5-7Q6L8G8 165 aa0.88□□□□□ -2.27
PTPN13-209ENST00000511467 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.28
PTPN13-209ENST00000511467 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
PTPN13-209ENST00000511467 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
PTPN13-209ENST00000511467 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
PTPN13-209ENST00000511467 KRTAP4-4Q9BYR3 166 aa0.7□□□□□ -2.3
PTPN13-209ENST00000511467 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms