RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 SPRR2AP35326 72 aa4.22□□□□□ -1.73
LEMD2-209ENST00000511171 USH2AO75445 5202 aa4.21□□□□□ -1.74
LEMD2-209ENST00000511171 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
LEMD2-209ENST00000511171 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
LEMD2-209ENST00000511171 MT1MQ8N339 61 aa4.12□□□□□ -1.75
LEMD2-209ENST00000511171 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
LEMD2-209ENST00000511171 KMT2DO14686 5537 aa4.09□□□□□ -1.75
LEMD2-209ENST00000511171 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
LEMD2-209ENST00000511171 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
LEMD2-209ENST00000511171 SPRR2DP22532 72 aa4.06□□□□□ -1.76
LEMD2-209ENST00000511171 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
LEMD2-209ENST00000511171 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
LEMD2-209ENST00000511171 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
LEMD2-209ENST00000511171 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
LEMD2-209ENST00000511171 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
LEMD2-209ENST00000511171 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
LEMD2-209ENST00000511171 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.79
LEMD2-209ENST00000511171 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
LEMD2-209ENST00000511171 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
LEMD2-209ENST00000511171 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
LEMD2-209ENST00000511171 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
LEMD2-209ENST00000511171 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
LEMD2-209ENST00000511171 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
LEMD2-209ENST00000511171 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
LEMD2-209ENST00000511171 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
LEMD2-209ENST00000511171 MT1AP04731 61 aa3.73□□□□□ -1.81
LEMD2-209ENST00000511171 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
LEMD2-209ENST00000511171 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.81
LEMD2-209ENST00000511171 MT3P25713 68 aa3.69□□□□□ -1.82
LEMD2-209ENST00000511171 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
LEMD2-209ENST00000511171 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
LEMD2-209ENST00000511171 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
LEMD2-209ENST00000511171 MT4P47944 62 aa3.63□□□□□ -1.83
LEMD2-209ENST00000511171 PRM1P04553 51 aa3.59□□□□□ -1.83
LEMD2-209ENST00000511171 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
LEMD2-209ENST00000511171 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
LEMD2-209ENST00000511171 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
LEMD2-209ENST00000511171 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
LEMD2-209ENST00000511171 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
LEMD2-209ENST00000511171 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
LEMD2-209ENST00000511171 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
LEMD2-209ENST00000511171 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
LEMD2-209ENST00000511171 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
LEMD2-209ENST00000511171 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
LEMD2-209ENST00000511171 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
LEMD2-209ENST00000511171 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
LEMD2-209ENST00000511171 NEBP20929 6669 aa3.15□□□□□ -1.91
LEMD2-209ENST00000511171 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
LEMD2-209ENST00000511171 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
LEMD2-209ENST00000511171 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
LEMD2-209ENST00000511171 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
LEMD2-209ENST00000511171 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
LEMD2-209ENST00000511171 LCE1CQ5T751 118 aa2.9□□□□□ -1.94
LEMD2-209ENST00000511171 LCE1EQ5T753 118 aa2.9□□□□□ -1.94
LEMD2-209ENST00000511171 LCE1FQ5T754 118 aa2.9□□□□□ -1.94
LEMD2-209ENST00000511171 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
LEMD2-209ENST00000511171 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
LEMD2-209ENST00000511171 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
LEMD2-209ENST00000511171 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
LEMD2-209ENST00000511171 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
LEMD2-209ENST00000511171 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
LEMD2-209ENST00000511171 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
LEMD2-209ENST00000511171 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
LEMD2-209ENST00000511171 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
LEMD2-209ENST00000511171 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
LEMD2-209ENST00000511171 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
LEMD2-209ENST00000511171 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
LEMD2-209ENST00000511171 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
LEMD2-209ENST00000511171 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
LEMD2-209ENST00000511171 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
LEMD2-209ENST00000511171 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
LEMD2-209ENST00000511171 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
LEMD2-209ENST00000511171 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
LEMD2-209ENST00000511171 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
LEMD2-209ENST00000511171 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
LEMD2-209ENST00000511171 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
LEMD2-209ENST00000511171 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
LEMD2-209ENST00000511171 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms