RNA–Protein interactions for RNA: ENST00000510168.5

ATP2C1-218, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ATP2C1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-218ENST00000510168 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.6
ATP2C1-218ENST00000510168 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.6
ATP2C1-218ENST00000510168 PCLOQ9Y6V0 5065 aa5.08□□□□□ -1.6
ATP2C1-218ENST00000510168 MT1MQ8N339 61 aa5.07□□□□□ -1.6
ATP2C1-218ENST00000510168 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
ATP2C1-218ENST00000510168 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
ATP2C1-218ENST00000510168 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
ATP2C1-218ENST00000510168 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
ATP2C1-218ENST00000510168 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
ATP2C1-218ENST00000510168 RNF213Q63HN8 5207 aa4.95□□□□□ -1.62
ATP2C1-218ENST00000510168 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
ATP2C1-218ENST00000510168 UBR4Q5T4S7 5183 aa4.93□□□□□ -1.62
ATP2C1-218ENST00000510168 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
ATP2C1-218ENST00000510168 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
ATP2C1-218ENST00000510168 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
ATP2C1-218ENST00000510168 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
ATP2C1-218ENST00000510168 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
ATP2C1-218ENST00000510168 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
ATP2C1-218ENST00000510168 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
ATP2C1-218ENST00000510168 MT4P47944 62 aa4.81□□□□□ -1.64
ATP2C1-218ENST00000510168 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
ATP2C1-218ENST00000510168 MT1AP04731 61 aa4.79□□□□□ -1.64
ATP2C1-218ENST00000510168 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
ATP2C1-218ENST00000510168 KMT2DO14686 5537 aa4.6□□□□□ -1.67
ATP2C1-218ENST00000510168 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
ATP2C1-218ENST00000510168 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
ATP2C1-218ENST00000510168 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
ATP2C1-218ENST00000510168 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
ATP2C1-218ENST00000510168 USH2AO75445 5202 aa4.51□□□□□ -1.69
ATP2C1-218ENST00000510168 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
ATP2C1-218ENST00000510168 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-218ENST00000510168 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
ATP2C1-218ENST00000510168 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
ATP2C1-218ENST00000510168 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
ATP2C1-218ENST00000510168 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
ATP2C1-218ENST00000510168 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
ATP2C1-218ENST00000510168 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
ATP2C1-218ENST00000510168 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
ATP2C1-218ENST00000510168 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
ATP2C1-218ENST00000510168 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
ATP2C1-218ENST00000510168 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
ATP2C1-218ENST00000510168 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.75
ATP2C1-218ENST00000510168 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
ATP2C1-218ENST00000510168 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
ATP2C1-218ENST00000510168 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
ATP2C1-218ENST00000510168 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
ATP2C1-218ENST00000510168 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
ATP2C1-218ENST00000510168 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
ATP2C1-218ENST00000510168 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
ATP2C1-218ENST00000510168 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
ATP2C1-218ENST00000510168 NEBP20929 6669 aa3.66□□□□□ -1.82
ATP2C1-218ENST00000510168 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.84
ATP2C1-218ENST00000510168 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
ATP2C1-218ENST00000510168 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
ATP2C1-218ENST00000510168 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
ATP2C1-218ENST00000510168 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
ATP2C1-218ENST00000510168 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
ATP2C1-218ENST00000510168 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
ATP2C1-218ENST00000510168 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
ATP2C1-218ENST00000510168 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
ATP2C1-218ENST00000510168 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
ATP2C1-218ENST00000510168 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
ATP2C1-218ENST00000510168 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
ATP2C1-218ENST00000510168 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
ATP2C1-218ENST00000510168 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
ATP2C1-218ENST00000510168 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
ATP2C1-218ENST00000510168 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
ATP2C1-218ENST00000510168 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
ATP2C1-218ENST00000510168 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
ATP2C1-218ENST00000510168 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
ATP2C1-218ENST00000510168 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
ATP2C1-218ENST00000510168 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
ATP2C1-218ENST00000510168 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
ATP2C1-218ENST00000510168 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
ATP2C1-218ENST00000510168 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
ATP2C1-218ENST00000510168 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
ATP2C1-218ENST00000510168 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 67.2 ms