RNA–Protein interactions for RNA: ENST00000509602.1

CAST-227, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-227ENST00000509602 R4GN34 69 aa1.67□□□□□ -2.14
CAST-227ENST00000509602 ACYP2P14621 99 aa1.66□□□□□ -2.14
CAST-227ENST00000509602 SMIM20Q8N5G0 67 aa1.66□□□□□ -2.14
CAST-227ENST00000509602 CYSTM1Q9H1C7 97 aa1.66□□□□□ -2.14
CAST-227ENST00000509602 LINC01554Q52M75 96 aa1.65□□□□□ -2.15
CAST-227ENST00000509602 C20orf197Q8N268 126 aa1.65□□□□□ -2.15
CAST-227ENST00000509602 SERP2Q8N6R1 65 aa1.65□□□□□ -2.15
CAST-227ENST00000509602 PLAC4Q8WY50 150 aa1.65□□□□□ -2.15
CAST-227ENST00000509602 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
CAST-227ENST00000509602 PRO2289Q9P1D8 64 aa1.64□□□□□ -2.15
CAST-227ENST00000509602 KRTAP8-1Q8IUC2 63 aa1.63□□□□□ -2.15
CAST-227ENST00000509602 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
CAST-227ENST00000509602 CHKB-CPT1BH3BT56 60 aa1.61□□□□□ -2.15
CAST-227ENST00000509602 H7BZZ5 65 aa1.61□□□□□ -2.15
CAST-227ENST00000509602 SPRR2EP22531 72 aa1.61□□□□□ -2.15
CAST-227ENST00000509602 SPRR2BP35325 72 aa1.61□□□□□ -2.15
CAST-227ENST00000509602 SPRR2AP35326 72 aa1.61□□□□□ -2.15
CAST-227ENST00000509602 COA5Q86WW8 74 aa1.61□□□□□ -2.15
CAST-227ENST00000509602 COX7CP15954 63 aa1.6□□□□□ -2.15
CAST-227ENST00000509602 SPTSSBQ8NFR3 76 aa1.6□□□□□ -2.15
CAST-227ENST00000509602 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
CAST-227ENST00000509602 KRTAP25-1Q3LHN0 102 aa1.58□□□□□ -2.16
CAST-227ENST00000509602 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
CAST-227ENST00000509602 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
CAST-227ENST00000509602 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
CAST-227ENST00000509602 SPRR2DP22532 72 aa1.56□□□□□ -2.16
CAST-227ENST00000509602 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
CAST-227ENST00000509602 A0A0D9SG42 100 aa1.55□□□□□ -2.16
CAST-227ENST00000509602 CCDC179H3BU77 68 aa1.55□□□□□ -2.16
CAST-227ENST00000509602 KRTAP12-1P59990 96 aa1.55□□□□□ -2.16
CAST-227ENST00000509602 MT1EP04732 61 aa1.54□□□□□ -2.16
CAST-227ENST00000509602 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
CAST-227ENST00000509602 A0A1B0GU33 70 aa1.53□□□□□ -2.16
CAST-227ENST00000509602 ANAPC13Q9BS18 74 aa1.53□□□□□ -2.16
CAST-227ENST00000509602 KRTAP2-1Q9BYU5 128 aa1.53□□□□□ -2.16
CAST-227ENST00000509602 PRO0628Q9UI54 55 aa1.53□□□□□ -2.16
CAST-227ENST00000509602 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
CAST-227ENST00000509602 SERP1Q9Y6X1 66 aa1.51□□□□□ -2.17
CAST-227ENST00000509602 KRTAP19-3Q7Z4W3 81 aa1.5□□□□□ -2.17
CAST-227ENST00000509602 C10orf95Q9H7T3 257 aa1.5□□□□□ -2.17
CAST-227ENST00000509602 A0A1B0GU69 56 aa1.49□□□□□ -2.17
CAST-227ENST00000509602 K7ERS5 55 aa1.49□□□□□ -2.17
CAST-227ENST00000509602 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
CAST-227ENST00000509602 MT1LQ93083 61 aa1.47□□□□□ -2.17
CAST-227ENST00000509602 LINC01558Q9Y6Z2 57 aa1.47□□□□□ -2.17
CAST-227ENST00000509602 ATP5EP56381 51 aaPredicted RBP1.46□□□□□ -2.18
CAST-227ENST00000509602 MT1MQ8N339 61 aa1.46□□□□□ -2.18
CAST-227ENST00000509602 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
CAST-227ENST00000509602 A6NED7 52 aa1.44□□□□□ -2.18
CAST-227ENST00000509602 MT1GP13640 62 aa1.44□□□□□ -2.18
CAST-227ENST00000509602 TMEM258P61165 79 aa1.44□□□□□ -2.18
CAST-227ENST00000509602 V9GYY9 64 aa1.44□□□□□ -2.18
CAST-227ENST00000509602 TNP1P09430 55 aa1.42□□□□□ -2.18
CAST-227ENST00000509602 PRR15LQ9BU68 103 aa1.41□□□□□ -2.18
CAST-227ENST00000509602 UQCR11O14957 56 aa1.39□□□□□ -2.19
CAST-227ENST00000509602 MIR22HGQ0VDD5 57 aa1.38□□□□□ -2.19
CAST-227ENST00000509602 MT4P47944 62 aa1.37□□□□□ -2.19
CAST-227ENST00000509602 Q1T7F1 81 aa1.37□□□□□ -2.19
CAST-227ENST00000509602 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
CAST-227ENST00000509602 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
CAST-227ENST00000509602 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
CAST-227ENST00000509602 RPS28P62857 69 aaKnown RBP1.29□□□□□ -2.2
CAST-227ENST00000509602 ROMO1P60602 79 aa1.26□□□□□ -2.21
CAST-227ENST00000509602 CDC42SE1Q9NRR8 79 aa1.26□□□□□ -2.21
CAST-227ENST00000509602 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
CAST-227ENST00000509602 MT1AP04731 61 aa1.24□□□□□ -2.21
CAST-227ENST00000509602 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
CAST-227ENST00000509602 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
CAST-227ENST00000509602 MUC5BQ9HC84 5762 aaPredicted RBP1.17□□□□□ -2.22
CAST-227ENST00000509602 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
CAST-227ENST00000509602 BRK1Q8WUW1 75 aa1.11□□□□□ -2.23
CAST-227ENST00000509602 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
CAST-227ENST00000509602 PMAIP1Q13794 54 aa1.03□□□□□ -2.24
CAST-227ENST00000509602 KTN1-AS1Q86SY8 53 aa1.01□□□□□ -2.25
CAST-227ENST00000509602 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
CAST-227ENST00000509602 PRM1P04553 51 aa0.67□□□□□ -2.3
CAST-227ENST00000509602 INE1O15225 51 aa0.66□□□□□ -2.3
CAST-227ENST00000509602 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 37.5 ms