RNA–Protein interactions for RNA: ENST00000509602.1

CAST-227, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-227ENST00000509602 AEBP2Q6ZN18 517 aaPredicted RBP29.93■■■□□ 2.38
CAST-227ENST00000509602 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
CAST-227ENST00000509602 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
CAST-227ENST00000509602 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
CAST-227ENST00000509602 FOXD1Q16676 465 aa23.8■■□□□ 1.4
CAST-227ENST00000509602 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
CAST-227ENST00000509602 PIAS4Q8N2W9 510 aaPredicted RBP22.43■■□□□ 1.18
CAST-227ENST00000509602 ADRA2BP18089 450 aa22.38■■□□□ 1.17
CAST-227ENST00000509602 MSH5O43196 834 aa22.36■■□□□ 1.17
CAST-227ENST00000509602 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
CAST-227ENST00000509602 POTEDQ86YR6 584 aa21.27■■□□□ 1
CAST-227ENST00000509602 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
CAST-227ENST00000509602 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
CAST-227ENST00000509602 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
CAST-227ENST00000509602 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
CAST-227ENST00000509602 CNKSR2Q8WXI2 1034 aa19.92■□□□□ 0.78
CAST-227ENST00000509602 NCBP3Q53F19 620 aaKnown RBP19.76■□□□□ 0.75
CAST-227ENST00000509602 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
CAST-227ENST00000509602 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
CAST-227ENST00000509602 RNF216Q9NWF9 866 aaPredicted RBP19.65■□□□□ 0.74
CAST-227ENST00000509602 NPM3O75607 178 aaKnown RBP19.28■□□□□ 0.68
CAST-227ENST00000509602 KCNA4P22459 653 aa19.1■□□□□ 0.65
CAST-227ENST00000509602 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
CAST-227ENST00000509602 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
CAST-227ENST00000509602 RNF39Q9H2S5 420 aa18.99■□□□□ 0.63
CAST-227ENST00000509602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
CAST-227ENST00000509602 C1QBPQ07021 282 aaKnown RBP18.81■□□□□ 0.6
CAST-227ENST00000509602 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
CAST-227ENST00000509602 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
CAST-227ENST00000509602 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
CAST-227ENST00000509602 APLP2Q06481 763 aa18.18■□□□□ 0.5
CAST-227ENST00000509602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
CAST-227ENST00000509602 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
CAST-227ENST00000509602 CAPN15O75808 1086 aa18.14■□□□□ 0.49
CAST-227ENST00000509602 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
CAST-227ENST00000509602 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
CAST-227ENST00000509602 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
CAST-227ENST00000509602 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
CAST-227ENST00000509602 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
CAST-227ENST00000509602 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
CAST-227ENST00000509602 DSG3P32926 999 aa17.84■□□□□ 0.45
CAST-227ENST00000509602 ABCB7O75027 752 aa17.67■□□□□ 0.42
CAST-227ENST00000509602 ZBTB22O15209 634 aa17.48■□□□□ 0.39
CAST-227ENST00000509602 POLA2Q14181 598 aa17.41■□□□□ 0.38
CAST-227ENST00000509602 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
CAST-227ENST00000509602 ATXN8OSP0DMR3 200 aa17.3■□□□□ 0.36
CAST-227ENST00000509602 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
CAST-227ENST00000509602 RBM42Q9BTD8 480 aaKnown RBP17.21■□□□□ 0.35
CAST-227ENST00000509602 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
CAST-227ENST00000509602 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
CAST-227ENST00000509602 FBLN2P98095 1184 aa16.9■□□□□ 0.3
CAST-227ENST00000509602 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
CAST-227ENST00000509602 POTEHQ6S545 545 aa16.78■□□□□ 0.28
CAST-227ENST00000509602 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
CAST-227ENST00000509602 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
CAST-227ENST00000509602 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
CAST-227ENST00000509602 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
CAST-227ENST00000509602 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
CAST-227ENST00000509602 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
CAST-227ENST00000509602 MKRN4PQ13434 485 aaPredicted RBP16.54■□□□□ 0.24
CAST-227ENST00000509602 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
CAST-227ENST00000509602 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
CAST-227ENST00000509602 SSUH2Q9Y2M2 353 aa16.34■□□□□ 0.21
CAST-227ENST00000509602 SPDYE1Q8NFV5 336 aaPredicted RBP16.31■□□□□ 0.2
CAST-227ENST00000509602 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
CAST-227ENST00000509602 PIP4P2Q8N4L2 257 aa16.23■□□□□ 0.19
CAST-227ENST00000509602 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
CAST-227ENST00000509602 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
CAST-227ENST00000509602 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
CAST-227ENST00000509602 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
CAST-227ENST00000509602 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
CAST-227ENST00000509602 HAX1O00165 279 aa15.98■□□□□ 0.15
CAST-227ENST00000509602 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
CAST-227ENST00000509602 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
CAST-227ENST00000509602 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
CAST-227ENST00000509602 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
CAST-227ENST00000509602 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
CAST-227ENST00000509602 EVX2Q03828 476 aa15.57■□□□□ 0.08
CAST-227ENST00000509602 PROM2Q8N271 834 aa15.55■□□□□ 0.08
CAST-227ENST00000509602 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
CAST-227ENST00000509602 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
CAST-227ENST00000509602 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
CAST-227ENST00000509602 FKBP8Q14318 412 aa15.47■□□□□ 0.07
CAST-227ENST00000509602 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
CAST-227ENST00000509602 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
CAST-227ENST00000509602 CLCN6P51797 869 aa15.37■□□□□ 0.05
CAST-227ENST00000509602 GABBR2O75899 941 aa15.36■□□□□ 0.05
CAST-227ENST00000509602 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
CAST-227ENST00000509602 MIER1Q8N108 512 aa15.33■□□□□ 0.04
CAST-227ENST00000509602 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
CAST-227ENST00000509602 ZNF579Q8NAF0 562 aaKnown RBP15.27■□□□□ 0.04
CAST-227ENST00000509602 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
CAST-227ENST00000509602 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
CAST-227ENST00000509602 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
CAST-227ENST00000509602 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
CAST-227ENST00000509602 TSPYL2Q9H2G4 693 aaPredicted RBP15.11■□□□□ 0.01
CAST-227ENST00000509602 PHF12Q96QT6 1004 aa15.09■□□□□ 0.01
CAST-227ENST00000509602 GALR2O43603 387 aaPredicted RBP15.01□□□□□ -0.01
CAST-227ENST00000509602 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
CAST-227ENST00000509602 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms