RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
PDE6A-202ENST00000508173 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
PDE6A-202ENST00000508173 KRTAP19-2Q3LHN2 52 aa2.72□□□□□ -1.97
PDE6A-202ENST00000508173 KRTAP4-8A0A0G2JLE6 195 aa2.71□□□□□ -1.98
PDE6A-202ENST00000508173 KRTAP4-8Q9BYQ9 185 aa2.71□□□□□ -1.98
PDE6A-202ENST00000508173 LRP2P98164 4655 aa2.7□□□□□ -1.98
PDE6A-202ENST00000508173 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
PDE6A-202ENST00000508173 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
PDE6A-202ENST00000508173 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
PDE6A-202ENST00000508173 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
PDE6A-202ENST00000508173 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.99
PDE6A-202ENST00000508173 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
PDE6A-202ENST00000508173 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
PDE6A-202ENST00000508173 UBR4Q5T4S7 5183 aa2.6□□□□□ -1.99
PDE6A-202ENST00000508173 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
PDE6A-202ENST00000508173 LCE4AQ5TA78 99 aa2.59□□□□□ -2
PDE6A-202ENST00000508173 LOC100996750A0A140TA64 210 aa2.55□□□□□ -2
PDE6A-202ENST00000508173 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
PDE6A-202ENST00000508173 MT1LQ93083 61 aa2.53□□□□□ -2
PDE6A-202ENST00000508173 PRM1P04553 51 aa2.5□□□□□ -2.01
PDE6A-202ENST00000508173 MT1EP04732 61 aa2.5□□□□□ -2.01
PDE6A-202ENST00000508173 RNF213Q63HN8 5207 aa2.5□□□□□ -2.01
PDE6A-202ENST00000508173 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
PDE6A-202ENST00000508173 MT1MQ8N339 61 aa2.46□□□□□ -2.02
PDE6A-202ENST00000508173 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
PDE6A-202ENST00000508173 HMCN2Q8NDA2 5059 aa2.45□□□□□ -2.02
PDE6A-202ENST00000508173 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
PDE6A-202ENST00000508173 KRTAP4-9Q9BYQ8 210 aa2.42□□□□□ -2.02
PDE6A-202ENST00000508173 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
PDE6A-202ENST00000508173 LCE1EQ5T753 118 aa2.41□□□□□ -2.02
PDE6A-202ENST00000508173 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
PDE6A-202ENST00000508173 NEBP20929 6669 aa2.38□□□□□ -2.03
PDE6A-202ENST00000508173 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
PDE6A-202ENST00000508173 FSIP2Q5CZC0 6907 aa2.35□□□□□ -2.03
PDE6A-202ENST00000508173 MT1AP04731 61 aa2.33□□□□□ -2.04
PDE6A-202ENST00000508173 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
PDE6A-202ENST00000508173 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.04
PDE6A-202ENST00000508173 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.05
PDE6A-202ENST00000508173 MUC2Q02817 5179 aa2.23□□□□□ -2.05
PDE6A-202ENST00000508173 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
PDE6A-202ENST00000508173 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
PDE6A-202ENST00000508173 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
PDE6A-202ENST00000508173 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.06
PDE6A-202ENST00000508173 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
PDE6A-202ENST00000508173 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
PDE6A-202ENST00000508173 USH2AO75445 5202 aa2.1□□□□□ -2.07
PDE6A-202ENST00000508173 KMT2DO14686 5537 aa2.1□□□□□ -2.07
PDE6A-202ENST00000508173 KRTAP4-6Q9BYQ5 205 aa2.05□□□□□ -2.08
PDE6A-202ENST00000508173 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
PDE6A-202ENST00000508173 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
PDE6A-202ENST00000508173 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.09
PDE6A-202ENST00000508173 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
PDE6A-202ENST00000508173 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
PDE6A-202ENST00000508173 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
PDE6A-202ENST00000508173 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.1
PDE6A-202ENST00000508173 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
PDE6A-202ENST00000508173 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
PDE6A-202ENST00000508173 KRTAP5-3Q6L8H2 238 aa1.88□□□□□ -2.11
PDE6A-202ENST00000508173 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
PDE6A-202ENST00000508173 DSTQ03001 7570 aaKnown RBP1.82□□□□□ -2.12
PDE6A-202ENST00000508173 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
PDE6A-202ENST00000508173 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
PDE6A-202ENST00000508173 MUC12Q9UKN1 5478 aa1.66□□□□□ -2.14
PDE6A-202ENST00000508173 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
PDE6A-202ENST00000508173 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
PDE6A-202ENST00000508173 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
PDE6A-202ENST00000508173 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
PDE6A-202ENST00000508173 PHGR1C9JFL3 82 aa1.59□□□□□ -2.16
PDE6A-202ENST00000508173 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PDE6A-202ENST00000508173 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
PDE6A-202ENST00000508173 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
PDE6A-202ENST00000508173 KRTAP5-2Q701N4 177 aa1.45□□□□□ -2.18
PDE6A-202ENST00000508173 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
PDE6A-202ENST00000508173 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
PDE6A-202ENST00000508173 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
PDE6A-202ENST00000508173 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PDE6A-202ENST00000508173 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
PDE6A-202ENST00000508173 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 64.2 ms