RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
PDE6A-202ENST00000508173 NISCHQ9Y2I1 1504 aa13.82□□□□□ -0.2
PDE6A-202ENST00000508173 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
PDE6A-202ENST00000508173 SUPT5HO00267 1087 aaKnown RBP12.78□□□□□ -0.36
PDE6A-202ENST00000508173 APLP2Q06481 763 aa12.67□□□□□ -0.38
PDE6A-202ENST00000508173 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
PDE6A-202ENST00000508173 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
PDE6A-202ENST00000508173 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
PDE6A-202ENST00000508173 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
PDE6A-202ENST00000508173 ABCC9O60706 1549 aa12.35□□□□□ -0.43
PDE6A-202ENST00000508173 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
PDE6A-202ENST00000508173 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
PDE6A-202ENST00000508173 TTBK1Q5TCY1 1321 aaPredicted RBP12.2□□□□□ -0.46
PDE6A-202ENST00000508173 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
PDE6A-202ENST00000508173 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
PDE6A-202ENST00000508173 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
PDE6A-202ENST00000508173 MYT1Q01538 1121 aa12.08□□□□□ -0.48
PDE6A-202ENST00000508173 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
PDE6A-202ENST00000508173 HRCP23327 699 aa12.04□□□□□ -0.48
PDE6A-202ENST00000508173 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDE6A-202ENST00000508173 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
PDE6A-202ENST00000508173 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
PDE6A-202ENST00000508173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
PDE6A-202ENST00000508173 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
PDE6A-202ENST00000508173 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
PDE6A-202ENST00000508173 CHIC1Q5VXU3 224 aa11.9□□□□□ -0.5
PDE6A-202ENST00000508173 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
PDE6A-202ENST00000508173 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
PDE6A-202ENST00000508173 FBLN2P98095 1184 aa11.78□□□□□ -0.52
PDE6A-202ENST00000508173 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.52
PDE6A-202ENST00000508173 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
PDE6A-202ENST00000508173 RB1CC1Q8TDY2 1594 aa11.74□□□□□ -0.53
PDE6A-202ENST00000508173 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
PDE6A-202ENST00000508173 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
PDE6A-202ENST00000508173 NEFLP07196 543 aa11.69□□□□□ -0.54
PDE6A-202ENST00000508173 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
PDE6A-202ENST00000508173 AEBP2Q6ZN18 517 aaPredicted RBP11.67□□□□□ -0.54
PDE6A-202ENST00000508173 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
PDE6A-202ENST00000508173 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
PDE6A-202ENST00000508173 DAXXQ9UER7 740 aaPredicted RBP11.61□□□□□ -0.55
PDE6A-202ENST00000508173 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
PDE6A-202ENST00000508173 TRHP20396 242 aaPredicted RBP11.58□□□□□ -0.56
PDE6A-202ENST00000508173 BCANQ96GW7 911 aa11.58□□□□□ -0.56
PDE6A-202ENST00000508173 NACADO15069 1562 aa11.55□□□□□ -0.56
PDE6A-202ENST00000508173 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
PDE6A-202ENST00000508173 ERCC6Q03468 1493 aa11.52□□□□□ -0.57
PDE6A-202ENST00000508173 DIEXFQ68CQ4 756 aaKnown RBP11.52□□□□□ -0.57
PDE6A-202ENST00000508173 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
PDE6A-202ENST00000508173 ITGAEP38570 1179 aa11.46□□□□□ -0.58
PDE6A-202ENST00000508173 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
PDE6A-202ENST00000508173 ZCCHC6Q5VYS8 1495 aaKnown RBP11.39□□□□□ -0.59
PDE6A-202ENST00000508173 ACIN1Q9UKV3 1341 aaKnown RBP11.38□□□□□ -0.59
PDE6A-202ENST00000508173 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
PDE6A-202ENST00000508173 NEFMP07197 916 aa11.36□□□□□ -0.59
PDE6A-202ENST00000508173 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
PDE6A-202ENST00000508173 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
PDE6A-202ENST00000508173 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
PDE6A-202ENST00000508173 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
PDE6A-202ENST00000508173 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
PDE6A-202ENST00000508173 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
PDE6A-202ENST00000508173 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
PDE6A-202ENST00000508173 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
PDE6A-202ENST00000508173 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
PDE6A-202ENST00000508173 CDK11AQ9UQ88 783 aaPredicted RBP11.2□□□□□ -0.62
PDE6A-202ENST00000508173 FAM50AQ14320 339 aaKnown RBP11.19□□□□□ -0.62
PDE6A-202ENST00000508173 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
PDE6A-202ENST00000508173 A0A0G2JS52 829 aa11.17□□□□□ -0.62
PDE6A-202ENST00000508173 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
PDE6A-202ENST00000508173 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
PDE6A-202ENST00000508173 BAZ1BQ9UIG0 1483 aaKnown RBP11.13□□□□□ -0.63
PDE6A-202ENST00000508173 CANXP27824 592 aaKnown RBP11.11□□□□□ -0.63
PDE6A-202ENST00000508173 DCAF1Q9Y4B6 1507 aa11.1□□□□□ -0.63
PDE6A-202ENST00000508173 BCL11AQ9H165 835 aa11.09□□□□□ -0.63
PDE6A-202ENST00000508173 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
PDE6A-202ENST00000508173 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
PDE6A-202ENST00000508173 CECR2Q9BXF3 1484 aa11.05□□□□□ -0.64
PDE6A-202ENST00000508173 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
PDE6A-202ENST00000508173 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
PDE6A-202ENST00000508173 OSCARQ8IYS5 282 aa11.02□□□□□ -0.64
PDE6A-202ENST00000508173 FKBP8Q14318 412 aa11.02□□□□□ -0.65
PDE6A-202ENST00000508173 EIF5BO60841 1220 aaKnown RBP11.02□□□□□ -0.65
PDE6A-202ENST00000508173 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
PDE6A-202ENST00000508173 MYO15BQ96JP2 1530 aa11□□□□□ -0.65
PDE6A-202ENST00000508173 ARID3CA6NKF2 412 aa10.99□□□□□ -0.65
PDE6A-202ENST00000508173 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
PDE6A-202ENST00000508173 NBR1Q14596 966 aa10.97□□□□□ -0.65
PDE6A-202ENST00000508173 CDK11BP21127 795 aaKnown RBP10.97□□□□□ -0.65
PDE6A-202ENST00000508173 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
PDE6A-202ENST00000508173 FOXD1Q16676 465 aa10.96□□□□□ -0.65
PDE6A-202ENST00000508173 ANP32CO43423 234 aa10.93□□□□□ -0.66
PDE6A-202ENST00000508173 ZBTB7CA1YPR0 619 aa10.93□□□□□ -0.66
PDE6A-202ENST00000508173 PPP1R15AO75807 674 aaPredicted RBP10.91□□□□□ -0.66
PDE6A-202ENST00000508173 DCAF8L1A6NGE4 600 aa10.9□□□□□ -0.66
PDE6A-202ENST00000508173 MIER1Q8N108 512 aa10.9□□□□□ -0.66
PDE6A-202ENST00000508173 NPHP1O15259 732 aa10.88□□□□□ -0.67
PDE6A-202ENST00000508173 ANP32EQ9BTT0 268 aa10.88□□□□□ -0.67
PDE6A-202ENST00000508173 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
PDE6A-202ENST00000508173 ANP32AP39687 249 aaKnown RBP10.86□□□□□ -0.67
PDE6A-202ENST00000508173 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
PDE6A-202ENST00000508173 CYB5RLQ6IPT4 315 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms