RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 PCLOQ9Y6V0 5065 aa2.37□□□□□ -2.03
COL6A4P1-204ENST00000508169 LPAP08519 4548 aa2.36□□□□□ -2.03
COL6A4P1-204ENST00000508169 H0YAA0 97 aa2.35□□□□□ -2.03
COL6A4P1-204ENST00000508169 KRTAP19-2Q3LHN2 52 aa2.35□□□□□ -2.03
COL6A4P1-204ENST00000508169 MUC17Q685J3 4493 aa2.35□□□□□ -2.03
COL6A4P1-204ENST00000508169 PLAC4Q8WY50 150 aa2.34□□□□□ -2.03
COL6A4P1-204ENST00000508169 S4R3F8 94 aa2.34□□□□□ -2.03
COL6A4P1-204ENST00000508169 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
COL6A4P1-204ENST00000508169 INE1O15225 51 aa2.33□□□□□ -2.04
COL6A4P1-204ENST00000508169 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
COL6A4P1-204ENST00000508169 HERC1Q15751 4861 aa2.32□□□□□ -2.04
COL6A4P1-204ENST00000508169 HMCN2Q8NDA2 5059 aa2.32□□□□□ -2.04
COL6A4P1-204ENST00000508169 FLGP20930 4061 aaPredicted RBP2.28□□□□□ -2.04
COL6A4P1-204ENST00000508169 M0QZ58 72 aa2.27□□□□□ -2.05
COL6A4P1-204ENST00000508169 MUC2Q02817 5179 aa2.26□□□□□ -2.05
COL6A4P1-204ENST00000508169 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
COL6A4P1-204ENST00000508169 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
COL6A4P1-204ENST00000508169 MT1HP80294 61 aa2.19□□□□□ -2.06
COL6A4P1-204ENST00000508169 RNF213Q63HN8 5207 aa2.18□□□□□ -2.06
COL6A4P1-204ENST00000508169 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
COL6A4P1-204ENST00000508169 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.07
COL6A4P1-204ENST00000508169 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.07
COL6A4P1-204ENST00000508169 M0R2T5 61 aa2.11□□□□□ -2.07
COL6A4P1-204ENST00000508169 MT2AP02795 61 aa2.11□□□□□ -2.07
COL6A4P1-204ENST00000508169 A0A0D9SG42 100 aa2.1□□□□□ -2.07
COL6A4P1-204ENST00000508169 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
COL6A4P1-204ENST00000508169 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
COL6A4P1-204ENST00000508169 MT1FP04733 61 aa2.08□□□□□ -2.08
COL6A4P1-204ENST00000508169 MT1BP07438 61 aa2.01□□□□□ -2.09
COL6A4P1-204ENST00000508169 TNP1P09430 55 aa1.97□□□□□ -2.09
COL6A4P1-204ENST00000508169 CRCT1Q9UGL9 99 aa1.97□□□□□ -2.09
COL6A4P1-204ENST00000508169 MT1XP80297 61 aa1.95□□□□□ -2.1
COL6A4P1-204ENST00000508169 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
COL6A4P1-204ENST00000508169 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
COL6A4P1-204ENST00000508169 USH2AO75445 5202 aa1.87□□□□□ -2.11
COL6A4P1-204ENST00000508169 FSIP2Q5CZC0 6907 aa1.83□□□□□ -2.12
COL6A4P1-204ENST00000508169 SSPOA2VEC9 5147 aa1.79□□□□□ -2.12
COL6A4P1-204ENST00000508169 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
COL6A4P1-204ENST00000508169 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
COL6A4P1-204ENST00000508169 FCGBPQ9Y6R7 5405 aaPredicted RBP1.74□□□□□ -2.13
COL6A4P1-204ENST00000508169 MT1EP04732 61 aa1.71□□□□□ -2.14
COL6A4P1-204ENST00000508169 MACF1Q9UPN3 7388 aaKnown RBP1.7□□□□□ -2.14
COL6A4P1-204ENST00000508169 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
COL6A4P1-204ENST00000508169 KMT2DO14686 5537 aa1.68□□□□□ -2.14
COL6A4P1-204ENST00000508169 MT1LQ93083 61 aa1.68□□□□□ -2.14
COL6A4P1-204ENST00000508169 MT1GP13640 62 aa1.67□□□□□ -2.14
COL6A4P1-204ENST00000508169 KRTAP19-3Q7Z4W3 81 aa1.65□□□□□ -2.15
COL6A4P1-204ENST00000508169 MT1MQ8N339 61 aa1.6□□□□□ -2.15
COL6A4P1-204ENST00000508169 SPRR2FQ96RM1 72 aa1.6□□□□□ -2.15
COL6A4P1-204ENST00000508169 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
COL6A4P1-204ENST00000508169 NEBP20929 6669 aa1.55□□□□□ -2.16
COL6A4P1-204ENST00000508169 KRTAP2-3P0C7H8 128 aa1.53□□□□□ -2.16
COL6A4P1-204ENST00000508169 KRTAP2-4Q9BYR9 128 aa1.53□□□□□ -2.16
COL6A4P1-204ENST00000508169 KRTAP2-1Q9BYU5 128 aa1.53□□□□□ -2.16
COL6A4P1-204ENST00000508169 SPRR2EP22531 72 aa1.51□□□□□ -2.17
COL6A4P1-204ENST00000508169 SPRR2BP35325 72 aa1.51□□□□□ -2.17
COL6A4P1-204ENST00000508169 SPRR2AP35326 72 aa1.51□□□□□ -2.17
COL6A4P1-204ENST00000508169 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
COL6A4P1-204ENST00000508169 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
COL6A4P1-204ENST00000508169 SPRR2DP22532 72 aa1.46□□□□□ -2.18
COL6A4P1-204ENST00000508169 MT1AP04731 61 aa1.44□□□□□ -2.18
COL6A4P1-204ENST00000508169 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
COL6A4P1-204ENST00000508169 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
COL6A4P1-204ENST00000508169 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
COL6A4P1-204ENST00000508169 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
COL6A4P1-204ENST00000508169 PRM1P04553 51 aa1.29□□□□□ -2.2
COL6A4P1-204ENST00000508169 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
COL6A4P1-204ENST00000508169 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
COL6A4P1-204ENST00000508169 MT4P47944 62 aa1.22□□□□□ -2.21
COL6A4P1-204ENST00000508169 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
COL6A4P1-204ENST00000508169 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
COL6A4P1-204ENST00000508169 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
COL6A4P1-204ENST00000508169 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
COL6A4P1-204ENST00000508169 GPR98Q8WXG9 6306 aa0.99□□□□□ -2.25
COL6A4P1-204ENST00000508169 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
COL6A4P1-204ENST00000508169 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
COL6A4P1-204ENST00000508169 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
COL6A4P1-204ENST00000508169 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 75.8 ms