RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 AEBP2Q6ZN18 517 aaPredicted RBP29.22■■■□□ 2.27
COL6A4P1-204ENST00000508169 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.26
COL6A4P1-204ENST00000508169 PHF23Q9BUL5 403 aaPredicted RBP25.68■■□□□ 1.7
COL6A4P1-204ENST00000508169 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
COL6A4P1-204ENST00000508169 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
COL6A4P1-204ENST00000508169 FOXD1Q16676 465 aa22.85■■□□□ 1.25
COL6A4P1-204ENST00000508169 ADRA2BP18089 450 aa22.48■■□□□ 1.19
COL6A4P1-204ENST00000508169 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
COL6A4P1-204ENST00000508169 PIAS4Q8N2W9 510 aaPredicted RBP21.73■■□□□ 1.07
COL6A4P1-204ENST00000508169 KCNA4P22459 653 aa21.35■■□□□ 1.01
COL6A4P1-204ENST00000508169 PPP4R3CPQ6ZMV5 832 aa21.17■□□□□ 0.98
COL6A4P1-204ENST00000508169 MSH5O43196 834 aa20.86■□□□□ 0.93
COL6A4P1-204ENST00000508169 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
COL6A4P1-204ENST00000508169 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
COL6A4P1-204ENST00000508169 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
COL6A4P1-204ENST00000508169 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
COL6A4P1-204ENST00000508169 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
COL6A4P1-204ENST00000508169 CNKSR2Q8WXI2 1034 aa20.44■□□□□ 0.86
COL6A4P1-204ENST00000508169 MAPK8IP2Q13387 824 aaPredicted RBP20.21■□□□□ 0.83
COL6A4P1-204ENST00000508169 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
COL6A4P1-204ENST00000508169 RNF216Q9NWF9 866 aaPredicted RBP19.89■□□□□ 0.77
COL6A4P1-204ENST00000508169 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.77
COL6A4P1-204ENST00000508169 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
COL6A4P1-204ENST00000508169 ZBTB22O15209 634 aa19.65■□□□□ 0.74
COL6A4P1-204ENST00000508169 HOXD11P31277 338 aaPredicted RBP19.65■□□□□ 0.74
COL6A4P1-204ENST00000508169 FOXD4L1Q9NU39 408 aa19.5■□□□□ 0.71
COL6A4P1-204ENST00000508169 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
COL6A4P1-204ENST00000508169 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
COL6A4P1-204ENST00000508169 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
COL6A4P1-204ENST00000508169 ATXN8OSP0DMR3 200 aa18.75■□□□□ 0.59
COL6A4P1-204ENST00000508169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.74■□□□□ 0.59
COL6A4P1-204ENST00000508169 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
COL6A4P1-204ENST00000508169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
COL6A4P1-204ENST00000508169 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
COL6A4P1-204ENST00000508169 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
COL6A4P1-204ENST00000508169 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
COL6A4P1-204ENST00000508169 APLP2Q06481 763 aa18.17■□□□□ 0.5
COL6A4P1-204ENST00000508169 FKBP8Q14318 412 aa18.09■□□□□ 0.49
COL6A4P1-204ENST00000508169 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
COL6A4P1-204ENST00000508169 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
COL6A4P1-204ENST00000508169 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
COL6A4P1-204ENST00000508169 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
COL6A4P1-204ENST00000508169 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
COL6A4P1-204ENST00000508169 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
COL6A4P1-204ENST00000508169 CAPN15O75808 1086 aa17.72■□□□□ 0.43
COL6A4P1-204ENST00000508169 POLA2Q14181 598 aa17.61■□□□□ 0.41
COL6A4P1-204ENST00000508169 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
COL6A4P1-204ENST00000508169 FBLN2P98095 1184 aa17.57■□□□□ 0.4
COL6A4P1-204ENST00000508169 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
COL6A4P1-204ENST00000508169 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
COL6A4P1-204ENST00000508169 RTN4Q9NQC3 1192 aaKnown RBP17.5■□□□□ 0.39
COL6A4P1-204ENST00000508169 ABCB7O75027 752 aa17.43■□□□□ 0.38
COL6A4P1-204ENST00000508169 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
COL6A4P1-204ENST00000508169 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
COL6A4P1-204ENST00000508169 PROM2Q8N271 834 aa17.28■□□□□ 0.36
COL6A4P1-204ENST00000508169 DSG3P32926 999 aa17.26■□□□□ 0.35
COL6A4P1-204ENST00000508169 VASPP50552 380 aaPredicted RBP17.03■□□□□ 0.32
COL6A4P1-204ENST00000508169 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
COL6A4P1-204ENST00000508169 OSCARQ8IYS5 282 aa17■□□□□ 0.31
COL6A4P1-204ENST00000508169 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
COL6A4P1-204ENST00000508169 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
COL6A4P1-204ENST00000508169 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
COL6A4P1-204ENST00000508169 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
COL6A4P1-204ENST00000508169 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.29
COL6A4P1-204ENST00000508169 IFNLR1Q8IU57 520 aaPredicted RBP16.83■□□□□ 0.28
COL6A4P1-204ENST00000508169 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
COL6A4P1-204ENST00000508169 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL6A4P1-204ENST00000508169 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
COL6A4P1-204ENST00000508169 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
COL6A4P1-204ENST00000508169 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
COL6A4P1-204ENST00000508169 SPOCK2Q92563 424 aa16.55■□□□□ 0.24
COL6A4P1-204ENST00000508169 MIER1Q8N108 512 aa16.53■□□□□ 0.24
COL6A4P1-204ENST00000508169 PKD2Q13563 968 aa16.5■□□□□ 0.23
COL6A4P1-204ENST00000508169 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
COL6A4P1-204ENST00000508169 PLEKHG5O94827 1062 aa16.42■□□□□ 0.22
COL6A4P1-204ENST00000508169 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
COL6A4P1-204ENST00000508169 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
COL6A4P1-204ENST00000508169 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
COL6A4P1-204ENST00000508169 SPDYE1Q8NFV5 336 aaPredicted RBP16.32■□□□□ 0.2
COL6A4P1-204ENST00000508169 ECM2O94769 699 aaPredicted RBP16.31■□□□□ 0.2
COL6A4P1-204ENST00000508169 CLEC11AQ9Y240 323 aa16.22■□□□□ 0.19
COL6A4P1-204ENST00000508169 PLCB2Q00722 1185 aa16.2■□□□□ 0.18
COL6A4P1-204ENST00000508169 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
COL6A4P1-204ENST00000508169 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
COL6A4P1-204ENST00000508169 PRR29P0C7W0 189 aa16.15■□□□□ 0.18
COL6A4P1-204ENST00000508169 RGL2O15211 777 aa16.11■□□□□ 0.17
COL6A4P1-204ENST00000508169 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
COL6A4P1-204ENST00000508169 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
COL6A4P1-204ENST00000508169 GSE1Q14687 1217 aa16.04■□□□□ 0.16
COL6A4P1-204ENST00000508169 NUBP1P53384 320 aa16.03■□□□□ 0.16
COL6A4P1-204ENST00000508169 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
COL6A4P1-204ENST00000508169 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
COL6A4P1-204ENST00000508169 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
COL6A4P1-204ENST00000508169 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
COL6A4P1-204ENST00000508169 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
COL6A4P1-204ENST00000508169 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
COL6A4P1-204ENST00000508169 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
COL6A4P1-204ENST00000508169 FAM212AQ96EL1 285 aa15.92■□□□□ 0.14
COL6A4P1-204ENST00000508169 CHGAP10645 457 aaKnown RBP15.88■□□□□ 0.13
COL6A4P1-204ENST00000508169 PAXIP1Q6ZW49 1069 aaPredicted RBP15.85■□□□□ 0.13
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