RNA–Protein interactions for RNA: ENST00000505870.5

GMDS-AS1-202, humanhuman

TSL 1 (best) BASIC

Gene GMDS-AS1, Length 8,217 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-AS1-202ENST00000505870 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
GMDS-AS1-202ENST00000505870 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
GMDS-AS1-202ENST00000505870 KRTAP9-8Q9BYQ0 159 aa2.62□□□□□ -1.99
GMDS-AS1-202ENST00000505870 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -1.99
GMDS-AS1-202ENST00000505870 MT1EP04732 61 aa2.59□□□□□ -2
GMDS-AS1-202ENST00000505870 KRTAP9-3Q9BYQ3 159 aa2.58□□□□□ -2
GMDS-AS1-202ENST00000505870 MT1MQ8N339 61 aa2.57□□□□□ -2
GMDS-AS1-202ENST00000505870 LOC100996750A0A140TA64 210 aa2.57□□□□□ -2
GMDS-AS1-202ENST00000505870 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
GMDS-AS1-202ENST00000505870 PCLOQ9Y6V0 5065 aa2.54□□□□□ -2
GMDS-AS1-202ENST00000505870 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2
GMDS-AS1-202ENST00000505870 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
GMDS-AS1-202ENST00000505870 KRTAP9-7A8MTY7 169 aa2.48□□□□□ -2.01
GMDS-AS1-202ENST00000505870 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
GMDS-AS1-202ENST00000505870 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
GMDS-AS1-202ENST00000505870 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
GMDS-AS1-202ENST00000505870 LRP2P98164 4655 aa2.46□□□□□ -2.02
GMDS-AS1-202ENST00000505870 LPAP08519 4548 aa2.46□□□□□ -2.02
GMDS-AS1-202ENST00000505870 KRTAP4-9Q9BYQ8 210 aa2.44□□□□□ -2.02
GMDS-AS1-202ENST00000505870 LCE2AQ5TA79 106 aaPredicted RBP2.44□□□□□ -2.02
GMDS-AS1-202ENST00000505870 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
GMDS-AS1-202ENST00000505870 HMCN2Q8NDA2 5059 aa2.41□□□□□ -2.02
GMDS-AS1-202ENST00000505870 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
GMDS-AS1-202ENST00000505870 MT1AP04731 61 aa2.39□□□□□ -2.03
GMDS-AS1-202ENST00000505870 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
GMDS-AS1-202ENST00000505870 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
GMDS-AS1-202ENST00000505870 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
GMDS-AS1-202ENST00000505870 RNF213Q63HN8 5207 aa2.33□□□□□ -2.04
GMDS-AS1-202ENST00000505870 FAT4Q6V0I7 4981 aa2.3□□□□□ -2.04
GMDS-AS1-202ENST00000505870 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
GMDS-AS1-202ENST00000505870 KRTAP9-4Q9BYQ2 154 aa2.27□□□□□ -2.05
GMDS-AS1-202ENST00000505870 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
GMDS-AS1-202ENST00000505870 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
GMDS-AS1-202ENST00000505870 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
GMDS-AS1-202ENST00000505870 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
GMDS-AS1-202ENST00000505870 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.2□□□□□ -2.06
GMDS-AS1-202ENST00000505870 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
GMDS-AS1-202ENST00000505870 KRTAP9-6A8MVA2 160 aa2.12□□□□□ -2.07
GMDS-AS1-202ENST00000505870 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
GMDS-AS1-202ENST00000505870 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
GMDS-AS1-202ENST00000505870 MUC2Q02817 5179 aa2.05□□□□□ -2.08
GMDS-AS1-202ENST00000505870 KRTAP4-6Q9BYQ5 205 aa1.97□□□□□ -2.09
GMDS-AS1-202ENST00000505870 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
GMDS-AS1-202ENST00000505870 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
GMDS-AS1-202ENST00000505870 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
GMDS-AS1-202ENST00000505870 USH2AO75445 5202 aa1.94□□□□□ -2.1
GMDS-AS1-202ENST00000505870 KRTAP5-9P26371 169 aa1.93□□□□□ -2.1
GMDS-AS1-202ENST00000505870 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.1
GMDS-AS1-202ENST00000505870 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
GMDS-AS1-202ENST00000505870 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
GMDS-AS1-202ENST00000505870 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
GMDS-AS1-202ENST00000505870 NEBP20929 6669 aa1.76□□□□□ -2.13
GMDS-AS1-202ENST00000505870 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
GMDS-AS1-202ENST00000505870 KMT2DO14686 5537 aa1.71□□□□□ -2.14
GMDS-AS1-202ENST00000505870 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
GMDS-AS1-202ENST00000505870 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
GMDS-AS1-202ENST00000505870 KRTAP5-4Q6L8H1 288 aa1.64□□□□□ -2.15
GMDS-AS1-202ENST00000505870 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
GMDS-AS1-202ENST00000505870 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
GMDS-AS1-202ENST00000505870 MDN1Q9NU22 5596 aa1.55□□□□□ -2.16
GMDS-AS1-202ENST00000505870 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
GMDS-AS1-202ENST00000505870 KRTAP5-3Q6L8H2 238 aa1.4□□□□□ -2.19
GMDS-AS1-202ENST00000505870 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
GMDS-AS1-202ENST00000505870 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
GMDS-AS1-202ENST00000505870 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
GMDS-AS1-202ENST00000505870 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
GMDS-AS1-202ENST00000505870 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
GMDS-AS1-202ENST00000505870 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
GMDS-AS1-202ENST00000505870 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
GMDS-AS1-202ENST00000505870 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
GMDS-AS1-202ENST00000505870 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
GMDS-AS1-202ENST00000505870 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
GMDS-AS1-202ENST00000505870 KRTAP5-11Q6L8G4 156 aa1.12□□□□□ -2.23
GMDS-AS1-202ENST00000505870 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
GMDS-AS1-202ENST00000505870 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
GMDS-AS1-202ENST00000505870 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
GMDS-AS1-202ENST00000505870 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 152.5 ms