RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 MUC17Q685J3 4493 aa2.16□□□□□ -2.06
UBE2D3-217ENST00000504211 LPAP08519 4548 aa2.15□□□□□ -2.06
UBE2D3-217ENST00000504211 UBR4Q5T4S7 5183 aa2.14□□□□□ -2.07
UBE2D3-217ENST00000504211 H0YAA0 97 aa2.14□□□□□ -2.07
UBE2D3-217ENST00000504211 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
UBE2D3-217ENST00000504211 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
UBE2D3-217ENST00000504211 CSAG1Q6PB30 78 aa2.12□□□□□ -2.07
UBE2D3-217ENST00000504211 M0QZ58 72 aa2.08□□□□□ -2.08
UBE2D3-217ENST00000504211 KRTAP19-2Q3LHN2 52 aa2.07□□□□□ -2.08
UBE2D3-217ENST00000504211 KRTAP4-1Q9BYQ7 146 aa2.07□□□□□ -2.08
UBE2D3-217ENST00000504211 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
UBE2D3-217ENST00000504211 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
UBE2D3-217ENST00000504211 A0A0D9SG42 100 aa2.01□□□□□ -2.09
UBE2D3-217ENST00000504211 ROMO1P60602 79 aa2.01□□□□□ -2.09
UBE2D3-217ENST00000504211 CRIPTQ9P021 101 aa2□□□□□ -2.09
UBE2D3-217ENST00000504211 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
UBE2D3-217ENST00000504211 MUC2Q02817 5179 aa1.99□□□□□ -2.09
UBE2D3-217ENST00000504211 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
UBE2D3-217ENST00000504211 FAT4Q6V0I7 4981 aa1.95□□□□□ -2.1
UBE2D3-217ENST00000504211 MT1HP80294 61 aa1.92□□□□□ -2.1
UBE2D3-217ENST00000504211 SPRR2GQ9BYE4 73 aa1.9□□□□□ -2.11
UBE2D3-217ENST00000504211 M0R2T5 61 aa1.89□□□□□ -2.11
UBE2D3-217ENST00000504211 C10orf95Q9H7T3 257 aa1.89□□□□□ -2.11
UBE2D3-217ENST00000504211 MT2AP02795 61 aa1.87□□□□□ -2.11
UBE2D3-217ENST00000504211 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
UBE2D3-217ENST00000504211 MT1FP04733 61 aa1.85□□□□□ -2.11
UBE2D3-217ENST00000504211 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
UBE2D3-217ENST00000504211 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.12
UBE2D3-217ENST00000504211 TNP1P09430 55 aa1.83□□□□□ -2.12
UBE2D3-217ENST00000504211 MT1BP07438 61 aa1.78□□□□□ -2.12
UBE2D3-217ENST00000504211 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
UBE2D3-217ENST00000504211 MT1XP80297 61 aa1.75□□□□□ -2.13
UBE2D3-217ENST00000504211 PRO2289Q9P1D8 64 aa1.74□□□□□ -2.13
UBE2D3-217ENST00000504211 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
UBE2D3-217ENST00000504211 USH2AO75445 5202 aa1.71□□□□□ -2.14
UBE2D3-217ENST00000504211 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
UBE2D3-217ENST00000504211 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
UBE2D3-217ENST00000504211 MACF1Q9UPN3 7388 aaKnown RBP1.64□□□□□ -2.15
UBE2D3-217ENST00000504211 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
UBE2D3-217ENST00000504211 KRTAP19-6Q3LI70 58 aa1.62□□□□□ -2.15
UBE2D3-217ENST00000504211 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
UBE2D3-217ENST00000504211 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
UBE2D3-217ENST00000504211 MT1EP04732 61 aa1.53□□□□□ -2.16
UBE2D3-217ENST00000504211 NEBP20929 6669 aa1.53□□□□□ -2.16
UBE2D3-217ENST00000504211 MT1LQ93083 61 aa1.51□□□□□ -2.17
UBE2D3-217ENST00000504211 KMT2DO14686 5537 aa1.51□□□□□ -2.17
UBE2D3-217ENST00000504211 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
UBE2D3-217ENST00000504211 MT1GP13640 62 aa1.47□□□□□ -2.17
UBE2D3-217ENST00000504211 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
UBE2D3-217ENST00000504211 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
UBE2D3-217ENST00000504211 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
UBE2D3-217ENST00000504211 MT1MQ8N339 61 aa1.43□□□□□ -2.18
UBE2D3-217ENST00000504211 MDN1Q9NU22 5596 aa1.42□□□□□ -2.18
UBE2D3-217ENST00000504211 INE1O15225 51 aa1.42□□□□□ -2.18
UBE2D3-217ENST00000504211 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
UBE2D3-217ENST00000504211 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
UBE2D3-217ENST00000504211 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
UBE2D3-217ENST00000504211 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
UBE2D3-217ENST00000504211 SPRR2EP22531 72 aa1.4□□□□□ -2.19
UBE2D3-217ENST00000504211 SPRR2BP35325 72 aa1.4□□□□□ -2.19
UBE2D3-217ENST00000504211 SPRR2AP35326 72 aa1.4□□□□□ -2.19
UBE2D3-217ENST00000504211 SPRR2DP22532 72 aa1.35□□□□□ -2.19
UBE2D3-217ENST00000504211 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
UBE2D3-217ENST00000504211 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
UBE2D3-217ENST00000504211 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
UBE2D3-217ENST00000504211 MT1AP04731 61 aa1.29□□□□□ -2.2
UBE2D3-217ENST00000504211 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
UBE2D3-217ENST00000504211 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
UBE2D3-217ENST00000504211 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
UBE2D3-217ENST00000504211 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
UBE2D3-217ENST00000504211 MT4P47944 62 aa1.18□□□□□ -2.22
UBE2D3-217ENST00000504211 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
UBE2D3-217ENST00000504211 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
UBE2D3-217ENST00000504211 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
UBE2D3-217ENST00000504211 PRM1P04553 51 aa1.04□□□□□ -2.24
UBE2D3-217ENST00000504211 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
UBE2D3-217ENST00000504211 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms