RNA–Protein interactions for RNA: ENST00000503823.5

SLIT2-202, Transcript of slit guidance ligand 2, humanhuman

TSL 1 (best) BASIC

Gene SLIT2, Length 5,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-202ENST00000503823 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
SLIT2-202ENST00000503823 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
SLIT2-202ENST00000503823 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
SLIT2-202ENST00000503823 MT1EP04732 61 aa4.1□□□□□ -1.75
SLIT2-202ENST00000503823 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
SLIT2-202ENST00000503823 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
SLIT2-202ENST00000503823 MT4P47944 62 aa4.07□□□□□ -1.76
SLIT2-202ENST00000503823 MT1LQ93083 61 aa4.06□□□□□ -1.76
SLIT2-202ENST00000503823 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
SLIT2-202ENST00000503823 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
SLIT2-202ENST00000503823 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
SLIT2-202ENST00000503823 MUC2Q02817 5179 aa4.01□□□□□ -1.77
SLIT2-202ENST00000503823 MT1MQ8N339 61 aa3.98□□□□□ -1.77
SLIT2-202ENST00000503823 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
SLIT2-202ENST00000503823 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.78
SLIT2-202ENST00000503823 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.78
SLIT2-202ENST00000503823 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SLIT2-202ENST00000503823 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
SLIT2-202ENST00000503823 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
SLIT2-202ENST00000503823 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
SLIT2-202ENST00000503823 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SLIT2-202ENST00000503823 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SLIT2-202ENST00000503823 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
SLIT2-202ENST00000503823 MT3P25713 68 aa3.74□□□□□ -1.81
SLIT2-202ENST00000503823 USH2AO75445 5202 aa3.73□□□□□ -1.81
SLIT2-202ENST00000503823 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
SLIT2-202ENST00000503823 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
SLIT2-202ENST00000503823 PRM1P04553 51 aa3.61□□□□□ -1.83
SLIT2-202ENST00000503823 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
SLIT2-202ENST00000503823 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
SLIT2-202ENST00000503823 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
SLIT2-202ENST00000503823 MT1AP04731 61 aa3.6□□□□□ -1.83
SLIT2-202ENST00000503823 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
SLIT2-202ENST00000503823 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
SLIT2-202ENST00000503823 NEBP20929 6669 aa3.54□□□□□ -1.84
SLIT2-202ENST00000503823 SSPOA2VEC9 5147 aa3.52□□□□□ -1.85
SLIT2-202ENST00000503823 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
SLIT2-202ENST00000503823 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
SLIT2-202ENST00000503823 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
SLIT2-202ENST00000503823 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
SLIT2-202ENST00000503823 KMT2DO14686 5537 aa3.4□□□□□ -1.87
SLIT2-202ENST00000503823 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
SLIT2-202ENST00000503823 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
SLIT2-202ENST00000503823 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
SLIT2-202ENST00000503823 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
SLIT2-202ENST00000503823 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
SLIT2-202ENST00000503823 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
SLIT2-202ENST00000503823 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
SLIT2-202ENST00000503823 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.92
SLIT2-202ENST00000503823 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
SLIT2-202ENST00000503823 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
SLIT2-202ENST00000503823 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
SLIT2-202ENST00000503823 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
SLIT2-202ENST00000503823 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
SLIT2-202ENST00000503823 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SLIT2-202ENST00000503823 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
SLIT2-202ENST00000503823 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
SLIT2-202ENST00000503823 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
SLIT2-202ENST00000503823 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
SLIT2-202ENST00000503823 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
SLIT2-202ENST00000503823 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SLIT2-202ENST00000503823 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SLIT2-202ENST00000503823 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
SLIT2-202ENST00000503823 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
SLIT2-202ENST00000503823 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
SLIT2-202ENST00000503823 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
SLIT2-202ENST00000503823 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
SLIT2-202ENST00000503823 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
SLIT2-202ENST00000503823 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
SLIT2-202ENST00000503823 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
SLIT2-202ENST00000503823 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
SLIT2-202ENST00000503823 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
SLIT2-202ENST00000503823 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
SLIT2-202ENST00000503823 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
SLIT2-202ENST00000503823 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
SLIT2-202ENST00000503823 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
SLIT2-202ENST00000503823 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 44 ms