RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MT1EP04732 61 aa5.31□□□□□ -1.56
HMGXB3-202ENST00000503427 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
HMGXB3-202ENST00000503427 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
HMGXB3-202ENST00000503427 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
HMGXB3-202ENST00000503427 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
HMGXB3-202ENST00000503427 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
HMGXB3-202ENST00000503427 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
HMGXB3-202ENST00000503427 MT1MQ8N339 61 aa5.12□□□□□ -1.59
HMGXB3-202ENST00000503427 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
HMGXB3-202ENST00000503427 MUC2Q02817 5179 aa5.05□□□□□ -1.6
HMGXB3-202ENST00000503427 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
HMGXB3-202ENST00000503427 MT4P47944 62 aa5.03□□□□□ -1.6
HMGXB3-202ENST00000503427 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
HMGXB3-202ENST00000503427 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
HMGXB3-202ENST00000503427 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
HMGXB3-202ENST00000503427 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
HMGXB3-202ENST00000503427 MT3P25713 68 aa4.91□□□□□ -1.62
HMGXB3-202ENST00000503427 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.62
HMGXB3-202ENST00000503427 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
HMGXB3-202ENST00000503427 PRM1P04553 51 aa4.83□□□□□ -1.64
HMGXB3-202ENST00000503427 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
HMGXB3-202ENST00000503427 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
HMGXB3-202ENST00000503427 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
HMGXB3-202ENST00000503427 MT1AP04731 61 aa4.76□□□□□ -1.65
HMGXB3-202ENST00000503427 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
HMGXB3-202ENST00000503427 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
HMGXB3-202ENST00000503427 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
HMGXB3-202ENST00000503427 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
HMGXB3-202ENST00000503427 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
HMGXB3-202ENST00000503427 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
HMGXB3-202ENST00000503427 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
HMGXB3-202ENST00000503427 USH2AO75445 5202 aa4.48□□□□□ -1.69
HMGXB3-202ENST00000503427 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
HMGXB3-202ENST00000503427 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
HMGXB3-202ENST00000503427 KMT2DO14686 5537 aa4.42□□□□□ -1.7
HMGXB3-202ENST00000503427 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
HMGXB3-202ENST00000503427 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
HMGXB3-202ENST00000503427 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
HMGXB3-202ENST00000503427 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
HMGXB3-202ENST00000503427 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
HMGXB3-202ENST00000503427 NEBP20929 6669 aa4.33□□□□□ -1.72
HMGXB3-202ENST00000503427 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
HMGXB3-202ENST00000503427 SSPOA2VEC9 5147 aa4.21□□□□□ -1.73
HMGXB3-202ENST00000503427 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
HMGXB3-202ENST00000503427 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
HMGXB3-202ENST00000503427 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
HMGXB3-202ENST00000503427 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
HMGXB3-202ENST00000503427 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
HMGXB3-202ENST00000503427 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
HMGXB3-202ENST00000503427 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
HMGXB3-202ENST00000503427 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
HMGXB3-202ENST00000503427 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
HMGXB3-202ENST00000503427 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
HMGXB3-202ENST00000503427 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
HMGXB3-202ENST00000503427 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
HMGXB3-202ENST00000503427 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
HMGXB3-202ENST00000503427 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
HMGXB3-202ENST00000503427 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
HMGXB3-202ENST00000503427 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
HMGXB3-202ENST00000503427 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
HMGXB3-202ENST00000503427 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
HMGXB3-202ENST00000503427 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
HMGXB3-202ENST00000503427 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
HMGXB3-202ENST00000503427 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
HMGXB3-202ENST00000503427 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
HMGXB3-202ENST00000503427 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
HMGXB3-202ENST00000503427 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
HMGXB3-202ENST00000503427 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
HMGXB3-202ENST00000503427 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
HMGXB3-202ENST00000503427 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
HMGXB3-202ENST00000503427 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
HMGXB3-202ENST00000503427 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
HMGXB3-202ENST00000503427 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
HMGXB3-202ENST00000503427 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
HMGXB3-202ENST00000503427 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
HMGXB3-202ENST00000503427 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
HMGXB3-202ENST00000503427 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 50 ms