RNA–Protein interactions for RNA: ENST00000500728.2

LRPAP1-202, Transcript of LDL receptor related protein associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPAP1, Length 7,819 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-202ENST00000500728 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
LRPAP1-202ENST00000500728 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
LRPAP1-202ENST00000500728 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
LRPAP1-202ENST00000500728 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
LRPAP1-202ENST00000500728 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
LRPAP1-202ENST00000500728 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
LRPAP1-202ENST00000500728 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
LRPAP1-202ENST00000500728 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
LRPAP1-202ENST00000500728 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
LRPAP1-202ENST00000500728 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
LRPAP1-202ENST00000500728 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
LRPAP1-202ENST00000500728 KRTAP19-2Q3LHN2 52 aa3.51□□□□□ -1.85
LRPAP1-202ENST00000500728 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
LRPAP1-202ENST00000500728 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
LRPAP1-202ENST00000500728 MT1AP04731 61 aa3.44□□□□□ -1.86
LRPAP1-202ENST00000500728 HERC2O95714 4834 aa3.43□□□□□ -1.86
LRPAP1-202ENST00000500728 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
LRPAP1-202ENST00000500728 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
LRPAP1-202ENST00000500728 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
LRPAP1-202ENST00000500728 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
LRPAP1-202ENST00000500728 RYR2Q92736 4967 aa3.35□□□□□ -1.87
LRPAP1-202ENST00000500728 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
LRPAP1-202ENST00000500728 KIAA1109Q2LD37 5005 aa3.34□□□□□ -1.87
LRPAP1-202ENST00000500728 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
LRPAP1-202ENST00000500728 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
LRPAP1-202ENST00000500728 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
LRPAP1-202ENST00000500728 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
LRPAP1-202ENST00000500728 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
LRPAP1-202ENST00000500728 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
LRPAP1-202ENST00000500728 LCE2AQ5TA79 106 aaPredicted RBP3.24□□□□□ -1.89
LRPAP1-202ENST00000500728 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
LRPAP1-202ENST00000500728 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.9
LRPAP1-202ENST00000500728 HERC1Q15751 4861 aa3.19□□□□□ -1.9
LRPAP1-202ENST00000500728 MUC2Q02817 5179 aa3.06□□□□□ -1.92
LRPAP1-202ENST00000500728 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
LRPAP1-202ENST00000500728 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
LRPAP1-202ENST00000500728 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
LRPAP1-202ENST00000500728 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
LRPAP1-202ENST00000500728 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
LRPAP1-202ENST00000500728 FAT4Q6V0I7 4981 aa2.92□□□□□ -1.94
LRPAP1-202ENST00000500728 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
LRPAP1-202ENST00000500728 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
LRPAP1-202ENST00000500728 KMT2DO14686 5537 aa2.86□□□□□ -1.95
LRPAP1-202ENST00000500728 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
LRPAP1-202ENST00000500728 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
LRPAP1-202ENST00000500728 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
LRPAP1-202ENST00000500728 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
LRPAP1-202ENST00000500728 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.96
LRPAP1-202ENST00000500728 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
LRPAP1-202ENST00000500728 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
LRPAP1-202ENST00000500728 NEBP20929 6669 aa2.55□□□□□ -2
LRPAP1-202ENST00000500728 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
LRPAP1-202ENST00000500728 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
LRPAP1-202ENST00000500728 USH2AO75445 5202 aa2.48□□□□□ -2.01
LRPAP1-202ENST00000500728 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
LRPAP1-202ENST00000500728 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
LRPAP1-202ENST00000500728 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
LRPAP1-202ENST00000500728 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
LRPAP1-202ENST00000500728 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
LRPAP1-202ENST00000500728 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
LRPAP1-202ENST00000500728 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
LRPAP1-202ENST00000500728 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
LRPAP1-202ENST00000500728 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
LRPAP1-202ENST00000500728 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
LRPAP1-202ENST00000500728 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
LRPAP1-202ENST00000500728 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
LRPAP1-202ENST00000500728 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
LRPAP1-202ENST00000500728 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
LRPAP1-202ENST00000500728 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
LRPAP1-202ENST00000500728 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.16
LRPAP1-202ENST00000500728 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
LRPAP1-202ENST00000500728 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
LRPAP1-202ENST00000500728 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
LRPAP1-202ENST00000500728 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.18
LRPAP1-202ENST00000500728 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
LRPAP1-202ENST00000500728 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
LRPAP1-202ENST00000500728 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 88.9 ms