RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 FAT1Q14517 4588 aa2.34□□□□□ -2.03
SNX13-212ENST00000498463 MUC2Q02817 5179 aa2.33□□□□□ -2.04
SNX13-212ENST00000498463 HSPG2P98160 4391 aa2.33□□□□□ -2.04
SNX13-212ENST00000498463 M0R2T5 61 aa2.32□□□□□ -2.04
SNX13-212ENST00000498463 TNXBP22105 4242 aa2.29□□□□□ -2.04
SNX13-212ENST00000498463 FAT3Q8TDW7 4589 aa2.27□□□□□ -2.05
SNX13-212ENST00000498463 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SNX13-212ENST00000498463 HERC2O95714 4834 aa2.25□□□□□ -2.05
SNX13-212ENST00000498463 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
SNX13-212ENST00000498463 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
SNX13-212ENST00000498463 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
SNX13-212ENST00000498463 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
SNX13-212ENST00000498463 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
SNX13-212ENST00000498463 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
SNX13-212ENST00000498463 HERC1Q15751 4861 aa2.15□□□□□ -2.07
SNX13-212ENST00000498463 SMR3BP02814 79 aaPredicted RBP2.11□□□□□ -2.07
SNX13-212ENST00000498463 FSIP2Q5CZC0 6907 aa2.1□□□□□ -2.07
SNX13-212ENST00000498463 MUC17Q685J3 4493 aa2.1□□□□□ -2.07
SNX13-212ENST00000498463 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
SNX13-212ENST00000498463 LPAP08519 4548 aa2.08□□□□□ -2.08
SNX13-212ENST00000498463 CRCT1Q9UGL9 99 aa2.08□□□□□ -2.08
SNX13-212ENST00000498463 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
SNX13-212ENST00000498463 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
SNX13-212ENST00000498463 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
SNX13-212ENST00000498463 FAT4Q6V0I7 4981 aa2.03□□□□□ -2.08
SNX13-212ENST00000498463 LRP2P98164 4655 aa2.02□□□□□ -2.09
SNX13-212ENST00000498463 RNF213Q63HN8 5207 aa2.02□□□□□ -2.09
SNX13-212ENST00000498463 MT1HL1P0DM35 61 aa2.01□□□□□ -2.09
SNX13-212ENST00000498463 HMCN2Q8NDA2 5059 aa1.99□□□□□ -2.09
SNX13-212ENST00000498463 NEBP20929 6669 aa1.96□□□□□ -2.1
SNX13-212ENST00000498463 KRTAP19-5Q3LI72 72 aa1.94□□□□□ -2.1
SNX13-212ENST00000498463 KRTAP19-8Q3LI54 63 aa1.92□□□□□ -2.1
SNX13-212ENST00000498463 MT1AP04731 61 aa1.88□□□□□ -2.11
SNX13-212ENST00000498463 KRTAP19-2Q3LHN2 52 aa1.88□□□□□ -2.11
SNX13-212ENST00000498463 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
SNX13-212ENST00000498463 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
SNX13-212ENST00000498463 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
SNX13-212ENST00000498463 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
SNX13-212ENST00000498463 PRM1P04553 51 aa1.83□□□□□ -2.12
SNX13-212ENST00000498463 MT1EP04732 61 aa1.83□□□□□ -2.12
SNX13-212ENST00000498463 MT1XP80297 61 aa1.83□□□□□ -2.12
SNX13-212ENST00000498463 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
SNX13-212ENST00000498463 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
SNX13-212ENST00000498463 MT1LQ93083 61 aa1.79□□□□□ -2.12
SNX13-212ENST00000498463 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
SNX13-212ENST00000498463 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SNX13-212ENST00000498463 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
SNX13-212ENST00000498463 MT1BP07438 61 aa1.7□□□□□ -2.14
SNX13-212ENST00000498463 MT1HP80294 61 aa1.69□□□□□ -2.14
SNX13-212ENST00000498463 SPRR2AP35326 72 aa1.68□□□□□ -2.14
SNX13-212ENST00000498463 SPRR2BP35325 72 aa1.66□□□□□ -2.14
SNX13-212ENST00000498463 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
SNX13-212ENST00000498463 KMT2DO14686 5537 aa1.65□□□□□ -2.14
SNX13-212ENST00000498463 MT2AP02795 61 aa1.64□□□□□ -2.15
SNX13-212ENST00000498463 MT1FP04733 61 aa1.64□□□□□ -2.15
SNX13-212ENST00000498463 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
SNX13-212ENST00000498463 KRTAP19-7Q3SYF9 63 aa1.61□□□□□ -2.15
SNX13-212ENST00000498463 SPRR2DP22532 72 aa1.6□□□□□ -2.15
SNX13-212ENST00000498463 USH2AO75445 5202 aa1.6□□□□□ -2.15
SNX13-212ENST00000498463 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
SNX13-212ENST00000498463 MUC12Q9UKN1 5478 aa1.58□□□□□ -2.16
SNX13-212ENST00000498463 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
SNX13-212ENST00000498463 SPRR2EP22531 72 aa1.55□□□□□ -2.16
SNX13-212ENST00000498463 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
SNX13-212ENST00000498463 MT1GP13640 62 aa1.54□□□□□ -2.16
SNX13-212ENST00000498463 HMCN1Q96RW7 5635 aa1.54□□□□□ -2.16
SNX13-212ENST00000498463 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
SNX13-212ENST00000498463 MT1MQ8N339 61 aa1.47□□□□□ -2.17
SNX13-212ENST00000498463 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
SNX13-212ENST00000498463 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
SNX13-212ENST00000498463 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
SNX13-212ENST00000498463 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
SNX13-212ENST00000498463 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
SNX13-212ENST00000498463 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
SNX13-212ENST00000498463 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
SNX13-212ENST00000498463 MT4P47944 62 aa1.07□□□□□ -2.24
SNX13-212ENST00000498463 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
SNX13-212ENST00000498463 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 42.8 ms