RNA–Protein interactions for RNA: ENST00000496420.5

PEX1-210, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-210ENST00000496420 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
PEX1-210ENST00000496420 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
PEX1-210ENST00000496420 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
PEX1-210ENST00000496420 MT3P25713 68 aa2.85□□□□□ -1.95
PEX1-210ENST00000496420 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.96
PEX1-210ENST00000496420 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
PEX1-210ENST00000496420 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
PEX1-210ENST00000496420 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
PEX1-210ENST00000496420 MT1LQ93083 61 aa2.82□□□□□ -1.96
PEX1-210ENST00000496420 MT1EP04732 61 aa2.81□□□□□ -1.96
PEX1-210ENST00000496420 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
PEX1-210ENST00000496420 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
PEX1-210ENST00000496420 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
PEX1-210ENST00000496420 MT1MQ8N339 61 aa2.77□□□□□ -1.97
PEX1-210ENST00000496420 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
PEX1-210ENST00000496420 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
PEX1-210ENST00000496420 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
PEX1-210ENST00000496420 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
PEX1-210ENST00000496420 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
PEX1-210ENST00000496420 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
PEX1-210ENST00000496420 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
PEX1-210ENST00000496420 LCE5AQ5TCM9 118 aa2.65□□□□□ -1.99
PEX1-210ENST00000496420 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
PEX1-210ENST00000496420 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
PEX1-210ENST00000496420 MT1AP04731 61 aa2.6□□□□□ -1.99
PEX1-210ENST00000496420 KRTAP4-7Q9BYR0 210 aa2.58□□□□□ -2
PEX1-210ENST00000496420 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
PEX1-210ENST00000496420 MUC2Q02817 5179 aa2.56□□□□□ -2
PEX1-210ENST00000496420 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
PEX1-210ENST00000496420 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
PEX1-210ENST00000496420 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
PEX1-210ENST00000496420 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
PEX1-210ENST00000496420 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
PEX1-210ENST00000496420 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
PEX1-210ENST00000496420 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
PEX1-210ENST00000496420 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
PEX1-210ENST00000496420 LOC100996750A0A140TA64 210 aa2.45□□□□□ -2.02
PEX1-210ENST00000496420 NEBP20929 6669 aa2.44□□□□□ -2.02
PEX1-210ENST00000496420 KRTAP9-4Q9BYQ2 154 aa2.38□□□□□ -2.03
PEX1-210ENST00000496420 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
PEX1-210ENST00000496420 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
PEX1-210ENST00000496420 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
PEX1-210ENST00000496420 PRM1P04553 51 aa2.3□□□□□ -2.04
PEX1-210ENST00000496420 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
PEX1-210ENST00000496420 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
PEX1-210ENST00000496420 KMT2DO14686 5537 aa2.24□□□□□ -2.05
PEX1-210ENST00000496420 USH2AO75445 5202 aa2.21□□□□□ -2.06
PEX1-210ENST00000496420 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
PEX1-210ENST00000496420 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
PEX1-210ENST00000496420 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
PEX1-210ENST00000496420 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
PEX1-210ENST00000496420 FCGBPQ9Y6R7 5405 aaPredicted RBP2.1□□□□□ -2.07
PEX1-210ENST00000496420 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
PEX1-210ENST00000496420 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
PEX1-210ENST00000496420 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
PEX1-210ENST00000496420 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
PEX1-210ENST00000496420 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
PEX1-210ENST00000496420 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
PEX1-210ENST00000496420 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
PEX1-210ENST00000496420 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
PEX1-210ENST00000496420 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
PEX1-210ENST00000496420 KRTAP4-2Q9BYR5 136 aa1.87□□□□□ -2.11
PEX1-210ENST00000496420 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.13
PEX1-210ENST00000496420 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
PEX1-210ENST00000496420 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
PEX1-210ENST00000496420 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
PEX1-210ENST00000496420 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
PEX1-210ENST00000496420 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
PEX1-210ENST00000496420 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
PEX1-210ENST00000496420 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
PEX1-210ENST00000496420 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
PEX1-210ENST00000496420 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
PEX1-210ENST00000496420 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
PEX1-210ENST00000496420 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
PEX1-210ENST00000496420 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
PEX1-210ENST00000496420 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PEX1-210ENST00000496420 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
PEX1-210ENST00000496420 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 1890.2 ms