RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
NF1-215ENST00000493220 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
NF1-215ENST00000493220 MT1EP04732 61 aa2.19□□□□□ -2.06
NF1-215ENST00000493220 KRTAP9-7A8MTY7 169 aa2.18□□□□□ -2.06
NF1-215ENST00000493220 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.17□□□□□ -2.06
NF1-215ENST00000493220 MT1LQ93083 61 aa2.15□□□□□ -2.06
NF1-215ENST00000493220 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
NF1-215ENST00000493220 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
NF1-215ENST00000493220 LCE3BQ5TA77 95 aa2.13□□□□□ -2.07
NF1-215ENST00000493220 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
NF1-215ENST00000493220 LCE1AQ5T7P2 110 aa2.11□□□□□ -2.07
NF1-215ENST00000493220 MT1MQ8N339 61 aa2.1□□□□□ -2.07
NF1-215ENST00000493220 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
NF1-215ENST00000493220 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
NF1-215ENST00000493220 LCE5AQ5TCM9 118 aa2.06□□□□□ -2.08
NF1-215ENST00000493220 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
NF1-215ENST00000493220 MUC2Q02817 5179 aa2.02□□□□□ -2.09
NF1-215ENST00000493220 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
NF1-215ENST00000493220 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
NF1-215ENST00000493220 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
NF1-215ENST00000493220 KRTAP9-4Q9BYQ2 154 aa1.99□□□□□ -2.09
NF1-215ENST00000493220 KRTAP4-7Q9BYR0 210 aa1.98□□□□□ -2.09
NF1-215ENST00000493220 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
NF1-215ENST00000493220 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
NF1-215ENST00000493220 LCE4AQ5TA78 99 aa1.97□□□□□ -2.09
NF1-215ENST00000493220 MT4P47944 62 aa1.97□□□□□ -2.09
NF1-215ENST00000493220 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
NF1-215ENST00000493220 USH2AO75445 5202 aa1.94□□□□□ -2.1
NF1-215ENST00000493220 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
NF1-215ENST00000493220 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
NF1-215ENST00000493220 SSPOA2VEC9 5147 aa1.92□□□□□ -2.1
NF1-215ENST00000493220 MT1AP04731 61 aa1.92□□□□□ -2.1
NF1-215ENST00000493220 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
NF1-215ENST00000493220 NEBP20929 6669 aa1.88□□□□□ -2.11
NF1-215ENST00000493220 SYNE2Q8WXH0 6885 aaKnown RBP1.87□□□□□ -2.11
NF1-215ENST00000493220 FSIP2Q5CZC0 6907 aa1.87□□□□□ -2.11
NF1-215ENST00000493220 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
NF1-215ENST00000493220 KRTAP9-9Q9BYP9 154 aa1.81□□□□□ -2.12
NF1-215ENST00000493220 PRM1P04553 51 aa1.81□□□□□ -2.12
NF1-215ENST00000493220 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
NF1-215ENST00000493220 LCE1DQ5T752 114 aa1.8□□□□□ -2.12
NF1-215ENST00000493220 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
NF1-215ENST00000493220 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
NF1-215ENST00000493220 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
NF1-215ENST00000493220 KRTAP4-9Q9BYQ8 210 aa1.79□□□□□ -2.12
NF1-215ENST00000493220 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
NF1-215ENST00000493220 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
NF1-215ENST00000493220 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
NF1-215ENST00000493220 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
NF1-215ENST00000493220 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
NF1-215ENST00000493220 KRTAP5-4Q6L8H1 288 aa1.68□□□□□ -2.14
NF1-215ENST00000493220 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
NF1-215ENST00000493220 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
NF1-215ENST00000493220 KMT2DO14686 5537 aa1.61□□□□□ -2.15
NF1-215ENST00000493220 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
NF1-215ENST00000493220 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
NF1-215ENST00000493220 KRTAP4-11Q9BYQ6 195 aa1.57□□□□□ -2.16
NF1-215ENST00000493220 DSTQ03001 7570 aaKnown RBP1.57□□□□□ -2.16
NF1-215ENST00000493220 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
NF1-215ENST00000493220 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
NF1-215ENST00000493220 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
NF1-215ENST00000493220 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
NF1-215ENST00000493220 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
NF1-215ENST00000493220 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
NF1-215ENST00000493220 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
NF1-215ENST00000493220 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
NF1-215ENST00000493220 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
NF1-215ENST00000493220 HMCN1Q96RW7 5635 aa1.25□□□□□ -2.21
NF1-215ENST00000493220 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
NF1-215ENST00000493220 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
NF1-215ENST00000493220 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
NF1-215ENST00000493220 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
NF1-215ENST00000493220 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
NF1-215ENST00000493220 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
NF1-215ENST00000493220 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
NF1-215ENST00000493220 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
NF1-215ENST00000493220 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
NF1-215ENST00000493220 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 154.7 ms