RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
TRIM11-204ENST00000493030 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
TRIM11-204ENST00000493030 LCE2AQ5TA79 106 aaPredicted RBP4.29□□□□□ -1.72
TRIM11-204ENST00000493030 MT1MQ8N339 61 aa4.26□□□□□ -1.73
TRIM11-204ENST00000493030 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
TRIM11-204ENST00000493030 MT3P25713 68 aa4.22□□□□□ -1.73
TRIM11-204ENST00000493030 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
TRIM11-204ENST00000493030 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
TRIM11-204ENST00000493030 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
TRIM11-204ENST00000493030 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
TRIM11-204ENST00000493030 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
TRIM11-204ENST00000493030 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
TRIM11-204ENST00000493030 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
TRIM11-204ENST00000493030 PRM1P04553 51 aa4.13□□□□□ -1.75
TRIM11-204ENST00000493030 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TRIM11-204ENST00000493030 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
TRIM11-204ENST00000493030 MUC2Q02817 5179 aa3.95□□□□□ -1.78
TRIM11-204ENST00000493030 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
TRIM11-204ENST00000493030 MT1AP04731 61 aa3.94□□□□□ -1.78
TRIM11-204ENST00000493030 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
TRIM11-204ENST00000493030 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
TRIM11-204ENST00000493030 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
TRIM11-204ENST00000493030 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
TRIM11-204ENST00000493030 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
TRIM11-204ENST00000493030 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
TRIM11-204ENST00000493030 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
TRIM11-204ENST00000493030 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
TRIM11-204ENST00000493030 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
TRIM11-204ENST00000493030 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
TRIM11-204ENST00000493030 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
TRIM11-204ENST00000493030 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
TRIM11-204ENST00000493030 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
TRIM11-204ENST00000493030 USH2AO75445 5202 aa3.67□□□□□ -1.82
TRIM11-204ENST00000493030 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
TRIM11-204ENST00000493030 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
TRIM11-204ENST00000493030 LCE4AQ5TA78 99 aa3.58□□□□□ -1.84
TRIM11-204ENST00000493030 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
TRIM11-204ENST00000493030 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
TRIM11-204ENST00000493030 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
TRIM11-204ENST00000493030 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
TRIM11-204ENST00000493030 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
TRIM11-204ENST00000493030 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.85
TRIM11-204ENST00000493030 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
TRIM11-204ENST00000493030 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
TRIM11-204ENST00000493030 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
TRIM11-204ENST00000493030 KMT2DO14686 5537 aa3.34□□□□□ -1.87
TRIM11-204ENST00000493030 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.89
TRIM11-204ENST00000493030 NEBP20929 6669 aa3.18□□□□□ -1.9
TRIM11-204ENST00000493030 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
TRIM11-204ENST00000493030 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
TRIM11-204ENST00000493030 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
TRIM11-204ENST00000493030 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
TRIM11-204ENST00000493030 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
TRIM11-204ENST00000493030 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
TRIM11-204ENST00000493030 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
TRIM11-204ENST00000493030 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
TRIM11-204ENST00000493030 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
TRIM11-204ENST00000493030 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
TRIM11-204ENST00000493030 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
TRIM11-204ENST00000493030 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
TRIM11-204ENST00000493030 MUC5ACP98088 5654 aa2.54□□□□□ -2
TRIM11-204ENST00000493030 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
TRIM11-204ENST00000493030 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
TRIM11-204ENST00000493030 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
TRIM11-204ENST00000493030 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
TRIM11-204ENST00000493030 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
TRIM11-204ENST00000493030 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
TRIM11-204ENST00000493030 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
TRIM11-204ENST00000493030 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
TRIM11-204ENST00000493030 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
TRIM11-204ENST00000493030 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
TRIM11-204ENST00000493030 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
TRIM11-204ENST00000493030 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
TRIM11-204ENST00000493030 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
TRIM11-204ENST00000493030 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
TRIM11-204ENST00000493030 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
TRIM11-204ENST00000493030 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms