RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 SPRR2DP22532 72 aa2.81□□□□□ -1.96
FNDC3A-204ENST00000492622 MT1EP04732 61 aa2.79□□□□□ -1.96
FNDC3A-204ENST00000492622 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
FNDC3A-204ENST00000492622 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
FNDC3A-204ENST00000492622 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
FNDC3A-204ENST00000492622 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
FNDC3A-204ENST00000492622 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
FNDC3A-204ENST00000492622 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
FNDC3A-204ENST00000492622 MT1MQ8N339 61 aa2.69□□□□□ -1.98
FNDC3A-204ENST00000492622 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
FNDC3A-204ENST00000492622 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
FNDC3A-204ENST00000492622 KMT2DO14686 5537 aa2.64□□□□□ -1.99
FNDC3A-204ENST00000492622 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
FNDC3A-204ENST00000492622 PRM1P04553 51 aa2.64□□□□□ -1.99
FNDC3A-204ENST00000492622 MT4P47944 62 aa2.64□□□□□ -1.99
FNDC3A-204ENST00000492622 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
FNDC3A-204ENST00000492622 USH2AO75445 5202 aa2.59□□□□□ -2
FNDC3A-204ENST00000492622 LCE2DQ5TA82 110 aaPredicted RBP2.58□□□□□ -2
FNDC3A-204ENST00000492622 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
FNDC3A-204ENST00000492622 LCE2AQ5TA79 106 aaPredicted RBP2.57□□□□□ -2
FNDC3A-204ENST00000492622 KRTAP9-2Q9BYQ4 174 aa2.55□□□□□ -2
FNDC3A-204ENST00000492622 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
FNDC3A-204ENST00000492622 LCE1DQ5T752 114 aa2.51□□□□□ -2.01
FNDC3A-204ENST00000492622 MT3P25713 68 aa2.5□□□□□ -2.01
FNDC3A-204ENST00000492622 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
FNDC3A-204ENST00000492622 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
FNDC3A-204ENST00000492622 KRTAP2-1Q9BYU5 128 aa2.5□□□□□ -2.01
FNDC3A-204ENST00000492622 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
FNDC3A-204ENST00000492622 MT1AP04731 61 aa2.42□□□□□ -2.02
FNDC3A-204ENST00000492622 KRTAP9-7A8MTY7 169 aa2.38□□□□□ -2.03
FNDC3A-204ENST00000492622 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
FNDC3A-204ENST00000492622 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
FNDC3A-204ENST00000492622 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.03
FNDC3A-204ENST00000492622 LCE5AQ5TCM9 118 aa2.32□□□□□ -2.04
FNDC3A-204ENST00000492622 LCE1AQ5T7P2 110 aa2.29□□□□□ -2.04
FNDC3A-204ENST00000492622 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
FNDC3A-204ENST00000492622 KRTAP9-6A0A140TA67 174 aa2.29□□□□□ -2.04
FNDC3A-204ENST00000492622 KRTAP9-4Q9BYQ2 154 aa2.25□□□□□ -2.05
FNDC3A-204ENST00000492622 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.19□□□□□ -2.06
FNDC3A-204ENST00000492622 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
FNDC3A-204ENST00000492622 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
FNDC3A-204ENST00000492622 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
FNDC3A-204ENST00000492622 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
FNDC3A-204ENST00000492622 KRTAP2-2Q9BYT5 123 aa2.06□□□□□ -2.08
FNDC3A-204ENST00000492622 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
FNDC3A-204ENST00000492622 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
FNDC3A-204ENST00000492622 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
FNDC3A-204ENST00000492622 KRTAP4-6Q9BYQ5 205 aa2.05□□□□□ -2.08
FNDC3A-204ENST00000492622 LCE4AQ5TA78 99 aa2.03□□□□□ -2.08
FNDC3A-204ENST00000492622 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
FNDC3A-204ENST00000492622 NEBP20929 6669 aa1.95□□□□□ -2.1
FNDC3A-204ENST00000492622 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
FNDC3A-204ENST00000492622 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
FNDC3A-204ENST00000492622 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
FNDC3A-204ENST00000492622 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
FNDC3A-204ENST00000492622 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
FNDC3A-204ENST00000492622 KRTAP4-2Q9BYR5 136 aa1.85□□□□□ -2.11
FNDC3A-204ENST00000492622 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
FNDC3A-204ENST00000492622 KRTAP9-9Q9BYP9 154 aa1.78□□□□□ -2.12
FNDC3A-204ENST00000492622 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
FNDC3A-204ENST00000492622 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
FNDC3A-204ENST00000492622 KRTAP5-4Q6L8H1 288 aa1.63□□□□□ -2.15
FNDC3A-204ENST00000492622 KRTAP5-3Q6L8H2 238 aa1.49□□□□□ -2.17
FNDC3A-204ENST00000492622 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
FNDC3A-204ENST00000492622 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
FNDC3A-204ENST00000492622 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
FNDC3A-204ENST00000492622 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
FNDC3A-204ENST00000492622 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
FNDC3A-204ENST00000492622 KRTAP5-1Q6L8H4 278 aa1.3□□□□□ -2.2
FNDC3A-204ENST00000492622 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
FNDC3A-204ENST00000492622 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
FNDC3A-204ENST00000492622 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
FNDC3A-204ENST00000492622 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
FNDC3A-204ENST00000492622 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
FNDC3A-204ENST00000492622 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
FNDC3A-204ENST00000492622 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
FNDC3A-204ENST00000492622 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 47.7 ms