RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LRP2P98164 4655 aa0.82□□□□□ -2.28
SNRNP40-207ENST00000491106 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
SNRNP40-207ENST00000491106 M0R2T5 61 aa0.81□□□□□ -2.28
SNRNP40-207ENST00000491106 KRTAP19-8Q3LI54 63 aa0.81□□□□□ -2.28
SNRNP40-207ENST00000491106 PRO2289Q9P1D8 64 aa0.81□□□□□ -2.28
SNRNP40-207ENST00000491106 KRTAP12-4P60329 112 aa0.8□□□□□ -2.28
SNRNP40-207ENST00000491106 DNHD1Q96M86 4753 aa0.8□□□□□ -2.28
SNRNP40-207ENST00000491106 LPAP08519 4548 aa0.79□□□□□ -2.28
SNRNP40-207ENST00000491106 HMCN1Q96RW7 5635 aa0.79□□□□□ -2.28
SNRNP40-207ENST00000491106 MT1HP80294 61 aa0.78□□□□□ -2.28
SNRNP40-207ENST00000491106 KRTAP21-2Q3LI59 83 aa0.78□□□□□ -2.28
SNRNP40-207ENST00000491106 MT2AP02795 61 aa0.77□□□□□ -2.29
SNRNP40-207ENST00000491106 FLGP20930 4061 aaPredicted RBP0.77□□□□□ -2.29
SNRNP40-207ENST00000491106 MT1FP04733 61 aa0.76□□□□□ -2.29
SNRNP40-207ENST00000491106 MT1BP07438 61 aa0.76□□□□□ -2.29
SNRNP40-207ENST00000491106 MT1XP80297 61 aa0.75□□□□□ -2.29
SNRNP40-207ENST00000491106 KMT2CQ8NEZ4 4911 aaKnown RBP0.75□□□□□ -2.29
SNRNP40-207ENST00000491106 RYR2Q92736 4967 aa0.74□□□□□ -2.29
SNRNP40-207ENST00000491106 RYR1P21817 5038 aa0.73□□□□□ -2.29
SNRNP40-207ENST00000491106 KIAA1109Q2LD37 5005 aa0.73□□□□□ -2.29
SNRNP40-207ENST00000491106 RYR3Q15413 4870 aa0.72□□□□□ -2.29
SNRNP40-207ENST00000491106 CRCT1Q9UGL9 99 aa0.72□□□□□ -2.29
SNRNP40-207ENST00000491106 HERC1Q15751 4861 aa0.71□□□□□ -2.3
SNRNP40-207ENST00000491106 KRTAP2-3P0C7H8 128 aa0.71□□□□□ -2.3
SNRNP40-207ENST00000491106 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
SNRNP40-207ENST00000491106 KRTAP2-4Q9BYR9 128 aa0.71□□□□□ -2.3
SNRNP40-207ENST00000491106 KRTAP2-1Q9BYU5 128 aa0.71□□□□□ -2.3
SNRNP40-207ENST00000491106 MT1EP04732 61 aa0.7□□□□□ -2.3
SNRNP40-207ENST00000491106 MT1LQ93083 61 aa0.7□□□□□ -2.3
SNRNP40-207ENST00000491106 ABCA13Q86UQ4 5058 aa0.7□□□□□ -2.3
SNRNP40-207ENST00000491106 HMCN2Q8NDA2 5059 aa0.7□□□□□ -2.3
SNRNP40-207ENST00000491106 BIRC6Q9NR09 4857 aa0.69□□□□□ -2.3
SNRNP40-207ENST00000491106 MT1GP13640 62 aa0.67□□□□□ -2.3
SNRNP40-207ENST00000491106 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
SNRNP40-207ENST00000491106 MUC2Q02817 5179 aa0.65□□□□□ -2.3
SNRNP40-207ENST00000491106 EPPK1P58107 5090 aaKnown RBP0.65□□□□□ -2.31
SNRNP40-207ENST00000491106 KRTAP19-6Q3LI70 58 aa0.65□□□□□ -2.31
SNRNP40-207ENST00000491106 PCLOQ9Y6V0 5065 aa0.64□□□□□ -2.31
SNRNP40-207ENST00000491106 MT1AP04731 61 aa0.64□□□□□ -2.31
SNRNP40-207ENST00000491106 HERC2O95714 4834 aa0.63□□□□□ -2.31
SNRNP40-207ENST00000491106 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
SNRNP40-207ENST00000491106 MT1MQ8N339 61 aa0.62□□□□□ -2.31
SNRNP40-207ENST00000491106 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
SNRNP40-207ENST00000491106 FCGBPQ9Y6R7 5405 aaPredicted RBP0.61□□□□□ -2.31
SNRNP40-207ENST00000491106 KRTAP6-3Q3LI67 103 aa0.61□□□□□ -2.31
SNRNP40-207ENST00000491106 UBR4Q5T4S7 5183 aa0.61□□□□□ -2.31
SNRNP40-207ENST00000491106 RNF213Q63HN8 5207 aa0.59□□□□□ -2.32
SNRNP40-207ENST00000491106 FAT4Q6V0I7 4981 aa0.58□□□□□ -2.32
SNRNP40-207ENST00000491106 SPRR2FQ96RM1 72 aa0.56□□□□□ -2.32
SNRNP40-207ENST00000491106 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
SNRNP40-207ENST00000491106 PRM1P04553 51 aa0.53□□□□□ -2.32
SNRNP40-207ENST00000491106 SSPOA2VEC9 5147 aa0.52□□□□□ -2.33
SNRNP40-207ENST00000491106 KMT2DO14686 5537 aa0.51□□□□□ -2.33
SNRNP40-207ENST00000491106 SPRR2EP22531 72 aa0.51□□□□□ -2.33
SNRNP40-207ENST00000491106 SPRR2BP35325 72 aa0.51□□□□□ -2.33
SNRNP40-207ENST00000491106 SPRR2AP35326 72 aa0.51□□□□□ -2.33
SNRNP40-207ENST00000491106 USH2AO75445 5202 aa0.5□□□□□ -2.33
SNRNP40-207ENST00000491106 KRTAP6-2Q3LI66 62 aa0.5□□□□□ -2.33
SNRNP40-207ENST00000491106 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
SNRNP40-207ENST00000491106 SPRR2DP22532 72 aa0.48□□□□□ -2.33
SNRNP40-207ENST00000491106 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
SNRNP40-207ENST00000491106 SYNE2Q8WXH0 6885 aaKnown RBP0.46□□□□□ -2.34
SNRNP40-207ENST00000491106 KRTAP20-2Q3LI61 65 aa0.43□□□□□ -2.34
SNRNP40-207ENST00000491106 MACF1Q9UPN3 7388 aaKnown RBP0.42□□□□□ -2.34
SNRNP40-207ENST00000491106 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
SNRNP40-207ENST00000491106 MT4P47944 62 aa0.41□□□□□ -2.34
SNRNP40-207ENST00000491106 KRTAP20-1Q3LI63 56 aa0.41□□□□□ -2.34
SNRNP40-207ENST00000491106 KRTAP5-10Q6L8G5 202 aa0.4□□□□□ -2.35
SNRNP40-207ENST00000491106 AHNAK2Q8IVF2 5795 aa0.37□□□□□ -2.35
SNRNP40-207ENST00000491106 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
SNRNP40-207ENST00000491106 MUC16Q8WXI7 14507 aa0.33□□□□□ -2.36
SNRNP40-207ENST00000491106 NEBP20929 6669 aa0.32□□□□□ -2.36
SNRNP40-207ENST00000491106 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
SNRNP40-207ENST00000491106 MUC5ACP98088 5654 aa0.31□□□□□ -2.36
SNRNP40-207ENST00000491106 AHNAKQ09666 5890 aaKnown RBP0.3□□□□□ -2.36
SNRNP40-207ENST00000491106 PHGR1C9JFL3 82 aa0.29□□□□□ -2.36
SNRNP40-207ENST00000491106 MUC5BQ9HC84 5762 aaPredicted RBP0.26□□□□□ -2.37
SNRNP40-207ENST00000491106 GPR98Q8WXG9 6306 aa0.11□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 71.9 ms