RNA–Protein interactions for RNA: ENST00000487842.1

SCML1-207, Transcript of Scm polycomb group protein like 1, humanhuman

TSL 1 (best)

Gene SCML1, Length 4,615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-207ENST00000487842 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
SCML1-207ENST00000487842 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
SCML1-207ENST00000487842 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
SCML1-207ENST00000487842 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
SCML1-207ENST00000487842 PRM1P04553 51 aa1.74□□□□□ -2.13
SCML1-207ENST00000487842 HERC2O95714 4834 aa1.74□□□□□ -2.13
SCML1-207ENST00000487842 HYDINQ4G0P3 5121 aa1.72□□□□□ -2.13
SCML1-207ENST00000487842 MT1AP04731 61 aa1.71□□□□□ -2.14
SCML1-207ENST00000487842 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
SCML1-207ENST00000487842 KMT2CQ8NEZ4 4911 aaKnown RBP1.71□□□□□ -2.14
SCML1-207ENST00000487842 MT1MQ8N339 61 aa1.7□□□□□ -2.14
SCML1-207ENST00000487842 LPAP08519 4548 aa1.67□□□□□ -2.14
SCML1-207ENST00000487842 KRTAP2-2Q9BYT5 123 aa1.66□□□□□ -2.14
SCML1-207ENST00000487842 LCE1AQ5T7P2 110 aa1.65□□□□□ -2.15
SCML1-207ENST00000487842 MT3P25713 68 aa1.64□□□□□ -2.15
SCML1-207ENST00000487842 SPRR2AP35326 72 aa1.64□□□□□ -2.15
SCML1-207ENST00000487842 BIRC6Q9NR09 4857 aa1.62□□□□□ -2.15
SCML1-207ENST00000487842 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
SCML1-207ENST00000487842 KRTAP4-11Q9BYQ6 195 aa1.61□□□□□ -2.15
SCML1-207ENST00000487842 LCE5AQ5TCM9 118 aa1.6□□□□□ -2.15
SCML1-207ENST00000487842 HMCN2Q8NDA2 5059 aa1.6□□□□□ -2.15
SCML1-207ENST00000487842 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
SCML1-207ENST00000487842 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
SCML1-207ENST00000487842 SPRR2BP35325 72 aa1.59□□□□□ -2.16
SCML1-207ENST00000487842 KRTAP9-7A8MTY7 169 aa1.58□□□□□ -2.16
SCML1-207ENST00000487842 SPRR2EP22531 72 aa1.58□□□□□ -2.16
SCML1-207ENST00000487842 KRTAP4-3Q9BYR4 195 aa1.55□□□□□ -2.16
SCML1-207ENST00000487842 KRTAP6-2Q3LI66 62 aa1.55□□□□□ -2.16
SCML1-207ENST00000487842 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
SCML1-207ENST00000487842 SPRR2DP22532 72 aa1.53□□□□□ -2.16
SCML1-207ENST00000487842 PCLOQ9Y6V0 5065 aa1.52□□□□□ -2.17
SCML1-207ENST00000487842 KRTAP5-9P26371 169 aa1.52□□□□□ -2.17
SCML1-207ENST00000487842 KRTAP5-2Q701N4 177 aa1.52□□□□□ -2.17
SCML1-207ENST00000487842 LCE4AQ5TA78 99 aa1.52□□□□□ -2.17
SCML1-207ENST00000487842 ABCA13Q86UQ4 5058 aa1.51□□□□□ -2.17
SCML1-207ENST00000487842 EPPK1P58107 5090 aaKnown RBP1.51□□□□□ -2.17
SCML1-207ENST00000487842 MUC2Q02817 5179 aa1.5□□□□□ -2.17
SCML1-207ENST00000487842 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
SCML1-207ENST00000487842 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
SCML1-207ENST00000487842 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
SCML1-207ENST00000487842 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
SCML1-207ENST00000487842 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
SCML1-207ENST00000487842 UBR4Q5T4S7 5183 aa1.46□□□□□ -2.18
SCML1-207ENST00000487842 KRTAP5-4Q6L8H1 288 aa1.4□□□□□ -2.19
SCML1-207ENST00000487842 OBSCNQ5VST9 7968 aa1.38□□□□□ -2.19
SCML1-207ENST00000487842 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
SCML1-207ENST00000487842 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
SCML1-207ENST00000487842 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
SCML1-207ENST00000487842 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
SCML1-207ENST00000487842 KMT2DO14686 5537 aa1.29□□□□□ -2.2
SCML1-207ENST00000487842 MT4P47944 62 aa1.28□□□□□ -2.2
SCML1-207ENST00000487842 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
SCML1-207ENST00000487842 USH2AO75445 5202 aa1.24□□□□□ -2.21
SCML1-207ENST00000487842 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
SCML1-207ENST00000487842 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
SCML1-207ENST00000487842 SSPOA2VEC9 5147 aa1.17□□□□□ -2.22
SCML1-207ENST00000487842 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
SCML1-207ENST00000487842 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
SCML1-207ENST00000487842 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
SCML1-207ENST00000487842 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
SCML1-207ENST00000487842 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
SCML1-207ENST00000487842 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
SCML1-207ENST00000487842 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
SCML1-207ENST00000487842 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.23
SCML1-207ENST00000487842 FSIP2Q5CZC0 6907 aa1.09□□□□□ -2.24
SCML1-207ENST00000487842 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
SCML1-207ENST00000487842 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
SCML1-207ENST00000487842 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
SCML1-207ENST00000487842 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
SCML1-207ENST00000487842 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SCML1-207ENST00000487842 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
SCML1-207ENST00000487842 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
SCML1-207ENST00000487842 NEBP20929 6669 aa0.9□□□□□ -2.27
SCML1-207ENST00000487842 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.27
SCML1-207ENST00000487842 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
SCML1-207ENST00000487842 KRTAP5-7Q6L8G8 165 aa0.69□□□□□ -2.3
SCML1-207ENST00000487842 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
SCML1-207ENST00000487842 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 123.6 ms