RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 MT1MQ8N339 61 aa2.98□□□□□ -1.93
PRDM15-212ENST00000486812 LOC100996750A0A140TA64 210 aa2.97□□□□□ -1.93
PRDM15-212ENST00000486812 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
PRDM15-212ENST00000486812 LCE2AQ5TA79 106 aaPredicted RBP2.96□□□□□ -1.94
PRDM15-212ENST00000486812 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
PRDM15-212ENST00000486812 MT4P47944 62 aa2.92□□□□□ -1.94
PRDM15-212ENST00000486812 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
PRDM15-212ENST00000486812 ABCA13Q86UQ4 5058 aa2.89□□□□□ -1.95
PRDM15-212ENST00000486812 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
PRDM15-212ENST00000486812 LPAP08519 4548 aa2.87□□□□□ -1.95
PRDM15-212ENST00000486812 LRP2P98164 4655 aa2.87□□□□□ -1.95
PRDM15-212ENST00000486812 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
PRDM15-212ENST00000486812 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
PRDM15-212ENST00000486812 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
PRDM15-212ENST00000486812 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
PRDM15-212ENST00000486812 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
PRDM15-212ENST00000486812 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
PRDM15-212ENST00000486812 HMCN2Q8NDA2 5059 aa2.78□□□□□ -1.96
PRDM15-212ENST00000486812 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
PRDM15-212ENST00000486812 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.97
PRDM15-212ENST00000486812 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
PRDM15-212ENST00000486812 EPPK1P58107 5090 aaKnown RBP2.72□□□□□ -1.97
PRDM15-212ENST00000486812 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
PRDM15-212ENST00000486812 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
PRDM15-212ENST00000486812 LCE5AQ5TCM9 118 aa2.66□□□□□ -1.98
PRDM15-212ENST00000486812 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.98
PRDM15-212ENST00000486812 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
PRDM15-212ENST00000486812 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
PRDM15-212ENST00000486812 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
PRDM15-212ENST00000486812 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
PRDM15-212ENST00000486812 LCE4AQ5TA78 99 aa2.54□□□□□ -2
PRDM15-212ENST00000486812 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
PRDM15-212ENST00000486812 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
PRDM15-212ENST00000486812 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
PRDM15-212ENST00000486812 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
PRDM15-212ENST00000486812 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.47□□□□□ -2.01
PRDM15-212ENST00000486812 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
PRDM15-212ENST00000486812 USH2AO75445 5202 aa2.35□□□□□ -2.03
PRDM15-212ENST00000486812 SYNE2Q8WXH0 6885 aaKnown RBP2.33□□□□□ -2.04
PRDM15-212ENST00000486812 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
PRDM15-212ENST00000486812 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
PRDM15-212ENST00000486812 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
PRDM15-212ENST00000486812 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
PRDM15-212ENST00000486812 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
PRDM15-212ENST00000486812 MUC2Q02817 5179 aa2.17□□□□□ -2.06
PRDM15-212ENST00000486812 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
PRDM15-212ENST00000486812 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
PRDM15-212ENST00000486812 NEBP20929 6669 aa2.06□□□□□ -2.08
PRDM15-212ENST00000486812 KMT2DO14686 5537 aa2□□□□□ -2.09
PRDM15-212ENST00000486812 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
PRDM15-212ENST00000486812 KRTAP4-6Q9BYQ5 205 aa1.97□□□□□ -2.09
PRDM15-212ENST00000486812 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
PRDM15-212ENST00000486812 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
PRDM15-212ENST00000486812 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
PRDM15-212ENST00000486812 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
PRDM15-212ENST00000486812 KRTAP5-4Q6L8H1 288 aa1.89□□□□□ -2.11
PRDM15-212ENST00000486812 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
PRDM15-212ENST00000486812 MACF1Q9UPN3 7388 aaKnown RBP1.83□□□□□ -2.12
PRDM15-212ENST00000486812 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
PRDM15-212ENST00000486812 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
PRDM15-212ENST00000486812 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
PRDM15-212ENST00000486812 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
PRDM15-212ENST00000486812 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
PRDM15-212ENST00000486812 KRTAP5-3Q6L8H2 238 aa1.64□□□□□ -2.15
PRDM15-212ENST00000486812 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
PRDM15-212ENST00000486812 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
PRDM15-212ENST00000486812 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
PRDM15-212ENST00000486812 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
PRDM15-212ENST00000486812 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
PRDM15-212ENST00000486812 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
PRDM15-212ENST00000486812 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
PRDM15-212ENST00000486812 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
PRDM15-212ENST00000486812 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
PRDM15-212ENST00000486812 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
PRDM15-212ENST00000486812 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
PRDM15-212ENST00000486812 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
PRDM15-212ENST00000486812 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
PRDM15-212ENST00000486812 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 108.3 ms