RNA–Protein interactions for RNA: ENST00000485886.1

MVB12B-204, Transcript of multivesicular body subunit 12B, humanhuman

TSL 2

Gene MVB12B, Length 4,537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-204ENST00000485886 SPRR2DP22532 72 aa4.3□□□□□ -1.72
MVB12B-204ENST00000485886 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
MVB12B-204ENST00000485886 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
MVB12B-204ENST00000485886 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
MVB12B-204ENST00000485886 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
MVB12B-204ENST00000485886 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
MVB12B-204ENST00000485886 MT1MQ8N339 61 aa4.14□□□□□ -1.75
MVB12B-204ENST00000485886 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
MVB12B-204ENST00000485886 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
MVB12B-204ENST00000485886 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
MVB12B-204ENST00000485886 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
MVB12B-204ENST00000485886 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
MVB12B-204ENST00000485886 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
MVB12B-204ENST00000485886 USH2AO75445 5202 aa3.98□□□□□ -1.77
MVB12B-204ENST00000485886 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
MVB12B-204ENST00000485886 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
MVB12B-204ENST00000485886 KMT2DO14686 5537 aa3.94□□□□□ -1.78
MVB12B-204ENST00000485886 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
MVB12B-204ENST00000485886 MT3P25713 68 aa3.89□□□□□ -1.79
MVB12B-204ENST00000485886 MT4P47944 62 aa3.88□□□□□ -1.79
MVB12B-204ENST00000485886 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
MVB12B-204ENST00000485886 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
MVB12B-204ENST00000485886 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
MVB12B-204ENST00000485886 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
MVB12B-204ENST00000485886 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
MVB12B-204ENST00000485886 PRM1P04553 51 aa3.79□□□□□ -1.8
MVB12B-204ENST00000485886 MT1AP04731 61 aa3.79□□□□□ -1.8
MVB12B-204ENST00000485886 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
MVB12B-204ENST00000485886 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
MVB12B-204ENST00000485886 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
MVB12B-204ENST00000485886 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
MVB12B-204ENST00000485886 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
MVB12B-204ENST00000485886 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
MVB12B-204ENST00000485886 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
MVB12B-204ENST00000485886 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
MVB12B-204ENST00000485886 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
MVB12B-204ENST00000485886 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
MVB12B-204ENST00000485886 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
MVB12B-204ENST00000485886 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
MVB12B-204ENST00000485886 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
MVB12B-204ENST00000485886 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
MVB12B-204ENST00000485886 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
MVB12B-204ENST00000485886 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
MVB12B-204ENST00000485886 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
MVB12B-204ENST00000485886 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
MVB12B-204ENST00000485886 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
MVB12B-204ENST00000485886 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
MVB12B-204ENST00000485886 NEBP20929 6669 aa3.19□□□□□ -1.9
MVB12B-204ENST00000485886 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.92
MVB12B-204ENST00000485886 LCE1CQ5T751 118 aa3□□□□□ -1.93
MVB12B-204ENST00000485886 LCE1EQ5T753 118 aa3□□□□□ -1.93
MVB12B-204ENST00000485886 LCE1FQ5T754 118 aa3□□□□□ -1.93
MVB12B-204ENST00000485886 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
MVB12B-204ENST00000485886 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
MVB12B-204ENST00000485886 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
MVB12B-204ENST00000485886 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
MVB12B-204ENST00000485886 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
MVB12B-204ENST00000485886 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
MVB12B-204ENST00000485886 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
MVB12B-204ENST00000485886 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
MVB12B-204ENST00000485886 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
MVB12B-204ENST00000485886 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
MVB12B-204ENST00000485886 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
MVB12B-204ENST00000485886 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
MVB12B-204ENST00000485886 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
MVB12B-204ENST00000485886 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
MVB12B-204ENST00000485886 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
MVB12B-204ENST00000485886 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
MVB12B-204ENST00000485886 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
MVB12B-204ENST00000485886 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
MVB12B-204ENST00000485886 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
MVB12B-204ENST00000485886 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
MVB12B-204ENST00000485886 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
MVB12B-204ENST00000485886 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
MVB12B-204ENST00000485886 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
MVB12B-204ENST00000485886 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
MVB12B-204ENST00000485886 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
MVB12B-204ENST00000485886 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 97.5 ms