RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 MT1LQ93083 61 aa3.36□□□□□ -1.87
STRC-211ENST00000485556 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
STRC-211ENST00000485556 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
STRC-211ENST00000485556 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
STRC-211ENST00000485556 SPRR2DP22532 72 aa3.32□□□□□ -1.88
STRC-211ENST00000485556 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
STRC-211ENST00000485556 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
STRC-211ENST00000485556 MT1MQ8N339 61 aa3.22□□□□□ -1.89
STRC-211ENST00000485556 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
STRC-211ENST00000485556 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
STRC-211ENST00000485556 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
STRC-211ENST00000485556 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
STRC-211ENST00000485556 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
STRC-211ENST00000485556 USH2AO75445 5202 aa3.11□□□□□ -1.91
STRC-211ENST00000485556 MT3P25713 68 aa3.11□□□□□ -1.91
STRC-211ENST00000485556 KMT2DO14686 5537 aa3.09□□□□□ -1.92
STRC-211ENST00000485556 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
STRC-211ENST00000485556 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
STRC-211ENST00000485556 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
STRC-211ENST00000485556 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
STRC-211ENST00000485556 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
STRC-211ENST00000485556 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
STRC-211ENST00000485556 MT4P47944 62 aa2.98□□□□□ -1.93
STRC-211ENST00000485556 MT1AP04731 61 aa2.94□□□□□ -1.94
STRC-211ENST00000485556 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
STRC-211ENST00000485556 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
STRC-211ENST00000485556 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
STRC-211ENST00000485556 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
STRC-211ENST00000485556 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.95
STRC-211ENST00000485556 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
STRC-211ENST00000485556 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
STRC-211ENST00000485556 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
STRC-211ENST00000485556 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
STRC-211ENST00000485556 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
STRC-211ENST00000485556 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
STRC-211ENST00000485556 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
STRC-211ENST00000485556 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
STRC-211ENST00000485556 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
STRC-211ENST00000485556 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
STRC-211ENST00000485556 PRM1P04553 51 aa2.8□□□□□ -1.96
STRC-211ENST00000485556 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
STRC-211ENST00000485556 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
STRC-211ENST00000485556 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
STRC-211ENST00000485556 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
STRC-211ENST00000485556 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
STRC-211ENST00000485556 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
STRC-211ENST00000485556 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
STRC-211ENST00000485556 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
STRC-211ENST00000485556 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
STRC-211ENST00000485556 NEBP20929 6669 aa2.53□□□□□ -2
STRC-211ENST00000485556 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
STRC-211ENST00000485556 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
STRC-211ENST00000485556 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
STRC-211ENST00000485556 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
STRC-211ENST00000485556 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.05
STRC-211ENST00000485556 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
STRC-211ENST00000485556 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
STRC-211ENST00000485556 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
STRC-211ENST00000485556 KRTAP4-11Q9BYQ6 195 aa2.11□□□□□ -2.07
STRC-211ENST00000485556 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
STRC-211ENST00000485556 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
STRC-211ENST00000485556 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
STRC-211ENST00000485556 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
STRC-211ENST00000485556 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
STRC-211ENST00000485556 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
STRC-211ENST00000485556 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
STRC-211ENST00000485556 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
STRC-211ENST00000485556 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
STRC-211ENST00000485556 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
STRC-211ENST00000485556 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
STRC-211ENST00000485556 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
STRC-211ENST00000485556 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
STRC-211ENST00000485556 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
STRC-211ENST00000485556 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
STRC-211ENST00000485556 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
STRC-211ENST00000485556 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
STRC-211ENST00000485556 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
STRC-211ENST00000485556 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 75.6 ms