RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
STRC-211ENST00000485556 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
STRC-211ENST00000485556 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
STRC-211ENST00000485556 SHROOM4Q9ULL8 1493 aa17.01■□□□□ 0.31
STRC-211ENST00000485556 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
STRC-211ENST00000485556 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
STRC-211ENST00000485556 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
STRC-211ENST00000485556 APLP2Q06481 763 aa15.69■□□□□ 0.1
STRC-211ENST00000485556 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
STRC-211ENST00000485556 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
STRC-211ENST00000485556 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
STRC-211ENST00000485556 ABCC9O60706 1549 aa15.55■□□□□ 0.08
STRC-211ENST00000485556 UBTFP17480 764 aaKnown RBP15.47■□□□□ 0.07
STRC-211ENST00000485556 CHIC1Q5VXU3 224 aa15.46■□□□□ 0.07
STRC-211ENST00000485556 LOC105371045A0A1W2PR82 267 aa15.33■□□□□ 0.04
STRC-211ENST00000485556 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
STRC-211ENST00000485556 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
STRC-211ENST00000485556 PPARGC1BQ86YN6 1023 aaKnown RBP15.29■□□□□ 0.04
STRC-211ENST00000485556 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
STRC-211ENST00000485556 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
STRC-211ENST00000485556 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
STRC-211ENST00000485556 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
STRC-211ENST00000485556 CCDC180Q9P1Z9 1646 aa15.05■□□□□ -0
STRC-211ENST00000485556 SCRIBQ14160 1630 aa14.96□□□□□ -0.02
STRC-211ENST00000485556 HRCP23327 699 aa14.92□□□□□ -0.02
STRC-211ENST00000485556 ITGAEP38570 1179 aa14.9□□□□□ -0.02
STRC-211ENST00000485556 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
STRC-211ENST00000485556 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
STRC-211ENST00000485556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
STRC-211ENST00000485556 CENPBP07199 599 aaPredicted RBP14.82□□□□□ -0.04
STRC-211ENST00000485556 MYT1Q01538 1121 aa14.73□□□□□ -0.05
STRC-211ENST00000485556 YTHDC1Q96MU7 727 aaKnown RBP14.7□□□□□ -0.06
STRC-211ENST00000485556 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
STRC-211ENST00000485556 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
STRC-211ENST00000485556 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
STRC-211ENST00000485556 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.08
STRC-211ENST00000485556 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
STRC-211ENST00000485556 NACADO15069 1562 aa14.54□□□□□ -0.08
STRC-211ENST00000485556 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
STRC-211ENST00000485556 FBLN2P98095 1184 aa14.5□□□□□ -0.09
STRC-211ENST00000485556 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
STRC-211ENST00000485556 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
STRC-211ENST00000485556 NEFLP07196 543 aa14.44□□□□□ -0.1
STRC-211ENST00000485556 DIEXFQ68CQ4 756 aaKnown RBP14.4□□□□□ -0.1
STRC-211ENST00000485556 MYO15BQ96JP2 1530 aa14.39□□□□□ -0.11
STRC-211ENST00000485556 ARID3CA6NKF2 412 aa14.38□□□□□ -0.11
STRC-211ENST00000485556 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
STRC-211ENST00000485556 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
STRC-211ENST00000485556 NEUROD1Q13562 356 aa14.37□□□□□ -0.11
STRC-211ENST00000485556 CNGB1Q14028 1251 aaPredicted RBP14.37□□□□□ -0.11
STRC-211ENST00000485556 SLC24A1O60721 1099 aa14.37□□□□□ -0.11
STRC-211ENST00000485556 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.12
STRC-211ENST00000485556 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.13
STRC-211ENST00000485556 WRNQ14191 1432 aaPredicted RBP eCLIP14.23□□□□□ -0.13
STRC-211ENST00000485556 ERICH6Q7L0X2 663 aa14.21□□□□□ -0.13
STRC-211ENST00000485556 CLIP1P30622 1438 aa14.18□□□□□ -0.14
STRC-211ENST00000485556 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
STRC-211ENST00000485556 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
STRC-211ENST00000485556 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
STRC-211ENST00000485556 ZNF777Q9ULD5 760 aaPredicted RBP14.17□□□□□ -0.14
STRC-211ENST00000485556 EEA1Q15075 1411 aa14.17□□□□□ -0.14
STRC-211ENST00000485556 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
STRC-211ENST00000485556 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
STRC-211ENST00000485556 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
STRC-211ENST00000485556 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
STRC-211ENST00000485556 KIF27Q86VH2 1401 aa14.05□□□□□ -0.16
STRC-211ENST00000485556 ANP32CO43423 234 aa14.04□□□□□ -0.16
STRC-211ENST00000485556 TNIKQ9UKE5 1360 aa14.04□□□□□ -0.16
STRC-211ENST00000485556 CHMP7Q8WUX9 453 aaPredicted RBP14.04□□□□□ -0.16
STRC-211ENST00000485556 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
STRC-211ENST00000485556 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
STRC-211ENST00000485556 CHIC2Q9UKJ5 165 aa14.03□□□□□ -0.16
STRC-211ENST00000485556 SOGA1O94964 1423 aa14.02□□□□□ -0.17
STRC-211ENST00000485556 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
STRC-211ENST00000485556 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
STRC-211ENST00000485556 ABCC8Q09428 1581 aa13.96□□□□□ -0.17
STRC-211ENST00000485556 WIZO95785 1651 aa13.96□□□□□ -0.17
STRC-211ENST00000485556 GTF3C3Q9Y5Q9 886 aa13.96□□□□□ -0.18
STRC-211ENST00000485556 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
STRC-211ENST00000485556 CUX2O14529 1486 aa13.89□□□□□ -0.19
STRC-211ENST00000485556 BCANQ96GW7 911 aa13.89□□□□□ -0.19
STRC-211ENST00000485556 TOP2AP11388 1531 aaKnown RBP13.88□□□□□ -0.19
STRC-211ENST00000485556 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
STRC-211ENST00000485556 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
STRC-211ENST00000485556 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
STRC-211ENST00000485556 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
STRC-211ENST00000485556 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
STRC-211ENST00000485556 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
STRC-211ENST00000485556 ACIN1Q9UKV3 1341 aaKnown RBP13.85□□□□□ -0.19
STRC-211ENST00000485556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
STRC-211ENST00000485556 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
STRC-211ENST00000485556 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
STRC-211ENST00000485556 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
STRC-211ENST00000485556 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
STRC-211ENST00000485556 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
STRC-211ENST00000485556 HIRIP3Q9BW71 556 aaPredicted RBP13.79□□□□□ -0.2
STRC-211ENST00000485556 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
STRC-211ENST00000485556 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
STRC-211ENST00000485556 CFDP1Q9UEE9 299 aaPredicted RBP13.74□□□□□ -0.21
STRC-211ENST00000485556 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms