RNA–Protein interactions for RNA: ENST00000484922.1

SHROOM4-205, Transcript of shroom family member 4, humanhuman

TSL 5

Gene SHROOM4, Length 295 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-205ENST00000484922 SPINT4Q6UDR6 99 aa1.09□□□□□ -2.23
SHROOM4-205ENST00000484922 RPS28P62857 69 aaKnown RBP1.08□□□□□ -2.24
SHROOM4-205ENST00000484922 Q1T7F1 81 aa1.08□□□□□ -2.24
SHROOM4-205ENST00000484922 MT1XP80297 61 aa1.07□□□□□ -2.24
SHROOM4-205ENST00000484922 KRTAP13-4Q3LI77 160 aa1.07□□□□□ -2.24
SHROOM4-205ENST00000484922 USH2AO75445 5202 aa1.06□□□□□ -2.24
SHROOM4-205ENST00000484922 KRTAP12-1P59990 96 aa1.06□□□□□ -2.24
SHROOM4-205ENST00000484922 KRTAP12-2P59991 146 aa1.06□□□□□ -2.24
SHROOM4-205ENST00000484922 MIR22HGQ0VDD5 57 aa1.06□□□□□ -2.24
SHROOM4-205ENST00000484922 KRTAP6-3Q3LI67 103 aa1.06□□□□□ -2.24
SHROOM4-205ENST00000484922 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
SHROOM4-205ENST00000484922 A6NED7 52 aa1.05□□□□□ -2.24
SHROOM4-205ENST00000484922 A8MU10 97 aa1.05□□□□□ -2.24
SHROOM4-205ENST00000484922 PSPHP1O15172 72 aa1.05□□□□□ -2.24
SHROOM4-205ENST00000484922 KRTAP8-1Q8IUC2 63 aa1.05□□□□□ -2.24
SHROOM4-205ENST00000484922 TNP1P09430 55 aa1.04□□□□□ -2.24
SHROOM4-205ENST00000484922 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
SHROOM4-205ENST00000484922 KRTAP5-5Q701N2 237 aaPredicted RBP1.03□□□□□ -2.24
SHROOM4-205ENST00000484922 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.24
SHROOM4-205ENST00000484922 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
SHROOM4-205ENST00000484922 CDC42SE1Q9NRR8 79 aa1.01□□□□□ -2.25
SHROOM4-205ENST00000484922 SPRR2EP22531 72 aa1□□□□□ -2.25
SHROOM4-205ENST00000484922 SPRR2BP35325 72 aa1□□□□□ -2.25
SHROOM4-205ENST00000484922 SPRR2AP35326 72 aa1□□□□□ -2.25
SHROOM4-205ENST00000484922 KRTAP25-1Q3LHN0 102 aa1□□□□□ -2.25
SHROOM4-205ENST00000484922 C10orf95Q9H7T3 257 aa0.99□□□□□ -2.25
SHROOM4-205ENST00000484922 LCE1CQ5T751 118 aa0.98□□□□□ -2.25
SHROOM4-205ENST00000484922 LCE1BQ5T7P3 118 aa0.98□□□□□ -2.25
SHROOM4-205ENST00000484922 PP632Q6XCG6 107 aa0.98□□□□□ -2.25
SHROOM4-205ENST00000484922 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
SHROOM4-205ENST00000484922 SPRR2DP22532 72 aa0.97□□□□□ -2.25
SHROOM4-205ENST00000484922 ROMO1P60602 79 aa0.97□□□□□ -2.25
SHROOM4-205ENST00000484922 KRTAP20-1Q3LI63 56 aa0.97□□□□□ -2.25
SHROOM4-205ENST00000484922 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
SHROOM4-205ENST00000484922 SYNE2Q8WXH0 6885 aaKnown RBP0.96□□□□□ -2.26
SHROOM4-205ENST00000484922 BRK1Q8WUW1 75 aa0.96□□□□□ -2.26
SHROOM4-205ENST00000484922 MT1GP13640 62 aa0.95□□□□□ -2.26
SHROOM4-205ENST00000484922 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
SHROOM4-205ENST00000484922 MT1EP04732 61 aa0.94□□□□□ -2.26
SHROOM4-205ENST00000484922 KRTAP12-3P60328 96 aa0.94□□□□□ -2.26
SHROOM4-205ENST00000484922 KRTAP19-5Q3LI72 72 aa0.94□□□□□ -2.26
SHROOM4-205ENST00000484922 KRTAP19-7Q3SYF9 63 aa0.94□□□□□ -2.26
SHROOM4-205ENST00000484922 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
SHROOM4-205ENST00000484922 KMT2DO14686 5537 aa0.93□□□□□ -2.26
SHROOM4-205ENST00000484922 PMAIP1Q13794 54 aa0.92□□□□□ -2.26
SHROOM4-205ENST00000484922 MUC12Q9UKN1 5478 aa0.91□□□□□ -2.26
SHROOM4-205ENST00000484922 MT1LQ93083 61 aa0.91□□□□□ -2.26
SHROOM4-205ENST00000484922 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
SHROOM4-205ENST00000484922 MT1MQ8N339 61 aa0.9□□□□□ -2.27
SHROOM4-205ENST00000484922 NEBP20929 6669 aa0.88□□□□□ -2.27
SHROOM4-205ENST00000484922 PRO0628Q9UI54 55 aa0.88□□□□□ -2.27
SHROOM4-205ENST00000484922 DSTQ03001 7570 aaKnown RBP0.88□□□□□ -2.27
SHROOM4-205ENST00000484922 HMCN1Q96RW7 5635 aa0.86□□□□□ -2.27
SHROOM4-205ENST00000484922 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
SHROOM4-205ENST00000484922 KTN1-AS1Q86SY8 53 aa0.84□□□□□ -2.27
SHROOM4-205ENST00000484922 MT4P47944 62 aa0.83□□□□□ -2.28
SHROOM4-205ENST00000484922 KRTAP12-4P60329 112 aa0.83□□□□□ -2.28
SHROOM4-205ENST00000484922 LCE3DQ9BYE3 92 aa0.82□□□□□ -2.28
SHROOM4-205ENST00000484922 SPRR5A0A1B0GTR4 108 aa0.81□□□□□ -2.28
SHROOM4-205ENST00000484922 KRTAP5-7Q6L8G8 165 aa0.8□□□□□ -2.28
SHROOM4-205ENST00000484922 MT1AP04731 61 aa0.79□□□□□ -2.28
SHROOM4-205ENST00000484922 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
SHROOM4-205ENST00000484922 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
SHROOM4-205ENST00000484922 LUZP6Q538Z0 58 aa0.77□□□□□ -2.29
SHROOM4-205ENST00000484922 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
SHROOM4-205ENST00000484922 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
SHROOM4-205ENST00000484922 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
SHROOM4-205ENST00000484922 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
SHROOM4-205ENST00000484922 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
SHROOM4-205ENST00000484922 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.3
SHROOM4-205ENST00000484922 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
SHROOM4-205ENST00000484922 INE1O15225 51 aa0.55□□□□□ -2.32
SHROOM4-205ENST00000484922 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
SHROOM4-205ENST00000484922 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
SHROOM4-205ENST00000484922 PRM1P04553 51 aa0.49□□□□□ -2.33
SHROOM4-205ENST00000484922 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
SHROOM4-205ENST00000484922 MUC16Q8WXI7 14507 aa0.38□□□□□ -2.35
SHROOM4-205ENST00000484922 KRTAP21-1Q3LI58 79 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 80.5 ms