RNA–Protein interactions for RNA: ENST00000484922.1

SHROOM4-205, Transcript of shroom family member 4, humanhuman

TSL 5

Gene SHROOM4, Length 295 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-205ENST00000484922 AEBP2Q6ZN18 517 aaPredicted RBP9.33□□□□□ -0.92
SHROOM4-205ENST00000484922 CHIC1Q5VXU3 224 aa8.69□□□□□ -1.02
SHROOM4-205ENST00000484922 SENP3Q9H4L4 574 aaPredicted RBP7.88□□□□□ -1.15
SHROOM4-205ENST00000484922 PHF23Q9BUL5 403 aaPredicted RBP7.84□□□□□ -1.15
SHROOM4-205ENST00000484922 POTEDQ86YR6 584 aa7.53□□□□□ -1.2
SHROOM4-205ENST00000484922 FOXD1Q16676 465 aa7.43□□□□□ -1.22
SHROOM4-205ENST00000484922 PPP6R1Q9UPN7 881 aa6.92□□□□□ -1.3
SHROOM4-205ENST00000484922 MSH5O43196 834 aa6.91□□□□□ -1.3
SHROOM4-205ENST00000484922 ADRA2BP18089 450 aa6.88□□□□□ -1.31
SHROOM4-205ENST00000484922 PIAS4Q8N2W9 510 aaPredicted RBP6.88□□□□□ -1.31
SHROOM4-205ENST00000484922 PLPPR3Q6T4P5 718 aa6.87□□□□□ -1.31
SHROOM4-205ENST00000484922 MAPK8IP2Q13387 824 aaPredicted RBP6.38□□□□□ -1.39
SHROOM4-205ENST00000484922 DMRT2Q9Y5R5 561 aa6.25□□□□□ -1.41
SHROOM4-205ENST00000484922 SCAF1Q9H7N4 1312 aaKnown RBP6.19□□□□□ -1.42
SHROOM4-205ENST00000484922 NISCHQ9Y2I1 1504 aa6.13□□□□□ -1.43
SHROOM4-205ENST00000484922 CACNB1Q02641 598 aaPredicted RBP6.07□□□□□ -1.44
SHROOM4-205ENST00000484922 DCAF8L1A6NGE4 600 aa6.05□□□□□ -1.44
SHROOM4-205ENST00000484922 PPP4R3CPQ6ZMV5 832 aa6.05□□□□□ -1.44
SHROOM4-205ENST00000484922 HOXD11P31277 338 aaPredicted RBP5.97□□□□□ -1.45
SHROOM4-205ENST00000484922 CNKSR2Q8WXI2 1034 aa5.93□□□□□ -1.46
SHROOM4-205ENST00000484922 RNF39Q9H2S5 420 aa5.93□□□□□ -1.46
SHROOM4-205ENST00000484922 RNF216Q9NWF9 866 aaPredicted RBP5.89□□□□□ -1.47
SHROOM4-205ENST00000484922 C1QBPQ07021 282 aaKnown RBP5.81□□□□□ -1.48
SHROOM4-205ENST00000484922 POTEHQ6S545 545 aa5.77□□□□□ -1.49
SHROOM4-205ENST00000484922 NCBP3Q53F19 620 aaKnown RBP5.74□□□□□ -1.49
SHROOM4-205ENST00000484922 DNAJC5BQ9UF47 199 aa5.73□□□□□ -1.49
SHROOM4-205ENST00000484922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.72□□□□□ -1.49
SHROOM4-205ENST00000484922 NPM3O75607 178 aaKnown RBP5.71□□□□□ -1.5
SHROOM4-205ENST00000484922 SPINK5Q9NQ38 1064 aaPredicted RBP5.58□□□□□ -1.52
SHROOM4-205ENST00000484922 U3KPZ7 1027 aaPredicted RBP5.58□□□□□ -1.52
SHROOM4-205ENST00000484922 CAPN15O75808 1086 aa5.54□□□□□ -1.52
SHROOM4-205ENST00000484922 KCNA4P22459 653 aa5.53□□□□□ -1.52
SHROOM4-205ENST00000484922 DSG3P32926 999 aa5.53□□□□□ -1.52
SHROOM4-205ENST00000484922 CCDC180Q9P1Z9 1646 aa5.5□□□□□ -1.53
SHROOM4-205ENST00000484922 SLC4A2P04920 1241 aa5.5□□□□□ -1.53
SHROOM4-205ENST00000484922 TRHP20396 242 aaPredicted RBP5.45□□□□□ -1.54
SHROOM4-205ENST00000484922 ABCB7O75027 752 aa5.43□□□□□ -1.54
SHROOM4-205ENST00000484922 ZNF219Q9P2Y4 722 aaPredicted RBP5.35□□□□□ -1.55
SHROOM4-205ENST00000484922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.31□□□□□ -1.56
SHROOM4-205ENST00000484922 APLP2Q06481 763 aa5.31□□□□□ -1.56
SHROOM4-205ENST00000484922 HNRNPUL2Q1KMD3 747 aaKnown RBP5.31□□□□□ -1.56
SHROOM4-205ENST00000484922 SAMD1Q6SPF0 538 aaPredicted RBP5.3□□□□□ -1.56
SHROOM4-205ENST00000484922 POLA2Q14181 598 aa5.28□□□□□ -1.56
SHROOM4-205ENST00000484922 ABCC9O60706 1549 aa5.28□□□□□ -1.56
SHROOM4-205ENST00000484922 MYCNP04198 464 aaPredicted RBP5.22□□□□□ -1.57
SHROOM4-205ENST00000484922 ATF5Q9Y2D1 282 aaPredicted RBP5.22□□□□□ -1.57
SHROOM4-205ENST00000484922 RBM42Q9BTD8 480 aaKnown RBP5.2□□□□□ -1.58
SHROOM4-205ENST00000484922 CHRDL2Q6WN34 429 aa5.19□□□□□ -1.58
SHROOM4-205ENST00000484922 SLC4A1APQ9BWU0 796 aaKnown RBP5.17□□□□□ -1.58
SHROOM4-205ENST00000484922 SP7Q8TDD2 431 aaPredicted RBP5.15□□□□□ -1.59
SHROOM4-205ENST00000484922 RB1CC1Q8TDY2 1594 aa5.15□□□□□ -1.59
SHROOM4-205ENST00000484922 NACADO15069 1562 aa5.14□□□□□ -1.59
SHROOM4-205ENST00000484922 DCAF8L2P0C7V8 631 aa5.13□□□□□ -1.59
SHROOM4-205ENST00000484922 FOXD4L1Q9NU39 408 aa5.13□□□□□ -1.59
SHROOM4-205ENST00000484922 MYO15BQ96JP2 1530 aa5.12□□□□□ -1.59
SHROOM4-205ENST00000484922 ZCCHC6Q5VYS8 1495 aaKnown RBP5.11□□□□□ -1.59
SHROOM4-205ENST00000484922 ZBTB22O15209 634 aa5.1□□□□□ -1.59
SHROOM4-205ENST00000484922 AKT1S1Q96B36 256 aa5.1□□□□□ -1.59
SHROOM4-205ENST00000484922 DCAF1Q9Y4B6 1507 aa5.1□□□□□ -1.59
SHROOM4-205ENST00000484922 REM2Q8IYK8 340 aaPredicted RBP5.09□□□□□ -1.59
SHROOM4-205ENST00000484922 OSCARQ8IYS5 282 aa5.09□□□□□ -1.59
SHROOM4-205ENST00000484922 PIP4P2Q8N4L2 257 aa5.06□□□□□ -1.6
SHROOM4-205ENST00000484922 ZBTB12Q9Y330 459 aaPredicted RBP5.05□□□□□ -1.6
SHROOM4-205ENST00000484922 UNC13AQ9UPW8 1703 aa5.03□□□□□ -1.6
SHROOM4-205ENST00000484922 PITPNM1O00562 1244 aa5.03□□□□□ -1.6
SHROOM4-205ENST00000484922 HAX1O00165 279 aa5.02□□□□□ -1.61
SHROOM4-205ENST00000484922 FXR2P51116 673 aaKnown RBP eCLIP5□□□□□ -1.61
SHROOM4-205ENST00000484922 EVX2Q03828 476 aa5□□□□□ -1.61
SHROOM4-205ENST00000484922 SCRIBQ14160 1630 aa4.97□□□□□ -1.61
SHROOM4-205ENST00000484922 ATXN8OSP0DMR3 200 aa4.96□□□□□ -1.62
SHROOM4-205ENST00000484922 MKRN4PQ13434 485 aaPredicted RBP4.95□□□□□ -1.62
SHROOM4-205ENST00000484922 SHROOM4Q9ULL8 1493 aa4.94□□□□□ -1.62
SHROOM4-205ENST00000484922 CLEC11AQ9Y240 323 aa4.93□□□□□ -1.62
SHROOM4-205ENST00000484922 BICRAQ9NZM4 1560 aa4.92□□□□□ -1.62
SHROOM4-205ENST00000484922 SPDYE2BA6NHP3 402 aa4.92□□□□□ -1.62
SHROOM4-205ENST00000484922 SPDYE6P0CI01 402 aa4.92□□□□□ -1.62
SHROOM4-205ENST00000484922 FBLN2P98095 1184 aa4.92□□□□□ -1.62
SHROOM4-205ENST00000484922 SPDYE2Q495Y8 402 aa4.92□□□□□ -1.62
SHROOM4-205ENST00000484922 PLSCR2Q9NRY7 297 aa4.92□□□□□ -1.62
SHROOM4-205ENST00000484922 PRKAR2AP13861 404 aaKnown RBP4.91□□□□□ -1.62
SHROOM4-205ENST00000484922 PABPN1Q86U42 306 aaKnown RBP eCLIP4.91□□□□□ -1.62
SHROOM4-205ENST00000484922 ZNF692Q9BU19 519 aaPredicted RBP4.9□□□□□ -1.63
SHROOM4-205ENST00000484922 CHADLQ6NUI6 762 aa4.87□□□□□ -1.63
SHROOM4-205ENST00000484922 SPDYE1Q8NFV5 336 aaPredicted RBP4.87□□□□□ -1.63
SHROOM4-205ENST00000484922 SSUH2Q9Y2M2 353 aa4.86□□□□□ -1.63
SHROOM4-205ENST00000484922 C19orf67A6NJJ6 358 aa4.84□□□□□ -1.63
SHROOM4-205ENST00000484922 GABBR2O75899 941 aa4.82□□□□□ -1.64
SHROOM4-205ENST00000484922 EIF4G1Q04637 1599 aaKnown RBP4.82□□□□□ -1.64
SHROOM4-205ENST00000484922 PRR29P0C7W0 189 aa4.81□□□□□ -1.64
SHROOM4-205ENST00000484922 LHX8Q68G74 356 aa4.81□□□□□ -1.64
SHROOM4-205ENST00000484922 CC2D2AQ9P2K1 1620 aa4.8□□□□□ -1.64
SHROOM4-205ENST00000484922 BAZ1AQ9NRL2 1556 aaPredicted RBP4.78□□□□□ -1.64
SHROOM4-205ENST00000484922 SMARCA4P51532 1647 aa4.76□□□□□ -1.65
SHROOM4-205ENST00000484922 SMARCA2P51531 1590 aa4.76□□□□□ -1.65
SHROOM4-205ENST00000484922 CSRNP3Q8WYN3 585 aa4.76□□□□□ -1.65
SHROOM4-205ENST00000484922 POTEIP0CG38 1075 aa4.75□□□□□ -1.65
SHROOM4-205ENST00000484922 CECR2Q9BXF3 1484 aa4.75□□□□□ -1.65
SHROOM4-205ENST00000484922 FARP1Q9Y4F1 1045 aaPredicted RBP4.74□□□□□ -1.65
SHROOM4-205ENST00000484922 CD44P16070 742 aaKnown RBP4.73□□□□□ -1.65
SHROOM4-205ENST00000484922 PEG3Q9GZU2 1588 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms