RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 FAT3Q8TDW7 4589 aa2.21□□□□□ -2.06
SGIP1-210ENST00000483060 DYNC1H1Q14204 4646 aaKnown RBP2.2□□□□□ -2.06
SGIP1-210ENST00000483060 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
SGIP1-210ENST00000483060 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
SGIP1-210ENST00000483060 HSPG2P98160 4391 aa2.19□□□□□ -2.06
SGIP1-210ENST00000483060 RYR2Q92736 4967 aa2.19□□□□□ -2.06
SGIP1-210ENST00000483060 HYDINQ4G0P3 5121 aa2.18□□□□□ -2.06
SGIP1-210ENST00000483060 FAT1Q14517 4588 aa2.17□□□□□ -2.06
SGIP1-210ENST00000483060 PCLOQ9Y6V0 5065 aa2.17□□□□□ -2.06
SGIP1-210ENST00000483060 HERC2O95714 4834 aa2.15□□□□□ -2.07
SGIP1-210ENST00000483060 CRCT1Q9UGL9 99 aa2.13□□□□□ -2.07
SGIP1-210ENST00000483060 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
SGIP1-210ENST00000483060 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
SGIP1-210ENST00000483060 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
SGIP1-210ENST00000483060 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
SGIP1-210ENST00000483060 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
SGIP1-210ENST00000483060 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
SGIP1-210ENST00000483060 M0R2T5 61 aa2.07□□□□□ -2.08
SGIP1-210ENST00000483060 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
SGIP1-210ENST00000483060 ABCA13Q86UQ4 5058 aa2.06□□□□□ -2.08
SGIP1-210ENST00000483060 HERC1Q15751 4861 aa2.04□□□□□ -2.08
SGIP1-210ENST00000483060 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
SGIP1-210ENST00000483060 UBR4Q5T4S7 5183 aa2.02□□□□□ -2.09
SGIP1-210ENST00000483060 MT1XP80297 61 aa1.98□□□□□ -2.09
SGIP1-210ENST00000483060 LRP2P98164 4655 aa1.97□□□□□ -2.09
SGIP1-210ENST00000483060 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
SGIP1-210ENST00000483060 LPAP08519 4548 aa1.94□□□□□ -2.1
SGIP1-210ENST00000483060 MT1BP07438 61 aa1.93□□□□□ -2.1
SGIP1-210ENST00000483060 MT2AP02795 61 aa1.92□□□□□ -2.1
SGIP1-210ENST00000483060 KRTAP19-5Q3LI72 72 aa1.92□□□□□ -2.1
SGIP1-210ENST00000483060 MT1FP04733 61 aa1.89□□□□□ -2.11
SGIP1-210ENST00000483060 HMCN2Q8NDA2 5059 aa1.88□□□□□ -2.11
SGIP1-210ENST00000483060 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
SGIP1-210ENST00000483060 MT1HP80294 61 aa1.88□□□□□ -2.11
SGIP1-210ENST00000483060 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
SGIP1-210ENST00000483060 MT1EP04732 61 aa1.86□□□□□ -2.11
SGIP1-210ENST00000483060 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
SGIP1-210ENST00000483060 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
SGIP1-210ENST00000483060 MT1LQ93083 61 aa1.83□□□□□ -2.12
SGIP1-210ENST00000483060 MT1AP04731 61 aa1.8□□□□□ -2.12
SGIP1-210ENST00000483060 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
SGIP1-210ENST00000483060 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
SGIP1-210ENST00000483060 MUC2Q02817 5179 aa1.75□□□□□ -2.13
SGIP1-210ENST00000483060 MT1GP13640 62 aa1.69□□□□□ -2.14
SGIP1-210ENST00000483060 FSIP2Q5CZC0 6907 aa1.66□□□□□ -2.14
SGIP1-210ENST00000483060 PRM1P04553 51 aa1.62□□□□□ -2.15
SGIP1-210ENST00000483060 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
SGIP1-210ENST00000483060 MT1MQ8N339 61 aa1.6□□□□□ -2.15
SGIP1-210ENST00000483060 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
SGIP1-210ENST00000483060 SPRR2AP35326 72 aa1.56□□□□□ -2.16
SGIP1-210ENST00000483060 SPRR2BP35325 72 aa1.51□□□□□ -2.17
SGIP1-210ENST00000483060 KRTAP19-6Q3LI70 58 aa1.51□□□□□ -2.17
SGIP1-210ENST00000483060 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
SGIP1-210ENST00000483060 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
SGIP1-210ENST00000483060 USH2AO75445 5202 aa1.48□□□□□ -2.17
SGIP1-210ENST00000483060 SPRR2EP22531 72 aa1.47□□□□□ -2.17
SGIP1-210ENST00000483060 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
SGIP1-210ENST00000483060 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
SGIP1-210ENST00000483060 SPRR2DP22532 72 aa1.43□□□□□ -2.18
SGIP1-210ENST00000483060 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
SGIP1-210ENST00000483060 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
SGIP1-210ENST00000483060 NEBP20929 6669 aa1.38□□□□□ -2.19
SGIP1-210ENST00000483060 MUC12Q9UKN1 5478 aa1.36□□□□□ -2.19
SGIP1-210ENST00000483060 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
SGIP1-210ENST00000483060 KMT2DO14686 5537 aa1.32□□□□□ -2.2
SGIP1-210ENST00000483060 GPR98Q8WXG9 6306 aa1.29□□□□□ -2.2
SGIP1-210ENST00000483060 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
SGIP1-210ENST00000483060 KRTAP5-10Q6L8G5 202 aa1.19□□□□□ -2.22
SGIP1-210ENST00000483060 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
SGIP1-210ENST00000483060 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
SGIP1-210ENST00000483060 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SGIP1-210ENST00000483060 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
SGIP1-210ENST00000483060 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
SGIP1-210ENST00000483060 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
SGIP1-210ENST00000483060 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
SGIP1-210ENST00000483060 MT4P47944 62 aa0.96□□□□□ -2.26
SGIP1-210ENST00000483060 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
SGIP1-210ENST00000483060 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 49 ms