RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 AEBP2Q6ZN18 517 aaPredicted RBP31.94■■■□□ 2.7
SGIP1-210ENST00000483060 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
SGIP1-210ENST00000483060 SENP3Q9H4L4 574 aaPredicted RBP27.39■■□□□ 1.98
SGIP1-210ENST00000483060 PHF23Q9BUL5 403 aaPredicted RBP26.96■■□□□ 1.91
SGIP1-210ENST00000483060 FOXD1Q16676 465 aa25.5■■□□□ 1.67
SGIP1-210ENST00000483060 MSH5O43196 834 aa24.06■■□□□ 1.44
SGIP1-210ENST00000483060 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
SGIP1-210ENST00000483060 POTEDQ86YR6 584 aa23.87■■□□□ 1.41
SGIP1-210ENST00000483060 PIAS4Q8N2W9 510 aaPredicted RBP23.79■■□□□ 1.4
SGIP1-210ENST00000483060 PPP6R1Q9UPN7 881 aa23.59■■□□□ 1.37
SGIP1-210ENST00000483060 ADRA2BP18089 450 aa23.52■■□□□ 1.36
SGIP1-210ENST00000483060 MAPK8IP2Q13387 824 aaPredicted RBP21.66■■□□□ 1.06
SGIP1-210ENST00000483060 DMRT2Q9Y5R5 561 aa21.66■■□□□ 1.06
SGIP1-210ENST00000483060 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
SGIP1-210ENST00000483060 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
SGIP1-210ENST00000483060 CACNB1Q02641 598 aaPredicted RBP20.78■□□□□ 0.92
SGIP1-210ENST00000483060 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
SGIP1-210ENST00000483060 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
SGIP1-210ENST00000483060 CNKSR2Q8WXI2 1034 aa20.67■□□□□ 0.9
SGIP1-210ENST00000483060 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
SGIP1-210ENST00000483060 RNF39Q9H2S5 420 aa20.45■□□□□ 0.86
SGIP1-210ENST00000483060 C1QBPQ07021 282 aaKnown RBP20.19■□□□□ 0.82
SGIP1-210ENST00000483060 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
SGIP1-210ENST00000483060 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
SGIP1-210ENST00000483060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.79■□□□□ 0.76
SGIP1-210ENST00000483060 NPM3O75607 178 aaKnown RBP19.76■□□□□ 0.75
SGIP1-210ENST00000483060 U3KPZ7 1027 aaPredicted RBP19.3■□□□□ 0.68
SGIP1-210ENST00000483060 CAPN15O75808 1086 aa19.11■□□□□ 0.65
SGIP1-210ENST00000483060 KCNA4P22459 653 aa19.11■□□□□ 0.65
SGIP1-210ENST00000483060 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
SGIP1-210ENST00000483060 DSG3P32926 999 aa19.05■□□□□ 0.64
SGIP1-210ENST00000483060 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
SGIP1-210ENST00000483060 APLP2Q06481 763 aa18.87■□□□□ 0.61
SGIP1-210ENST00000483060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
SGIP1-210ENST00000483060 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
SGIP1-210ENST00000483060 ZNF219Q9P2Y4 722 aaPredicted RBP18.74■□□□□ 0.59
SGIP1-210ENST00000483060 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
SGIP1-210ENST00000483060 POTEHQ6S545 545 aa18.68■□□□□ 0.58
SGIP1-210ENST00000483060 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
SGIP1-210ENST00000483060 ABCB7O75027 752 aa18.6■□□□□ 0.57
SGIP1-210ENST00000483060 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
SGIP1-210ENST00000483060 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
SGIP1-210ENST00000483060 POLA2Q14181 598 aa18.16■□□□□ 0.5
SGIP1-210ENST00000483060 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
SGIP1-210ENST00000483060 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
SGIP1-210ENST00000483060 CHRDL2Q6WN34 429 aa17.91■□□□□ 0.46
SGIP1-210ENST00000483060 ZBTB12Q9Y330 459 aaPredicted RBP17.86■□□□□ 0.45
SGIP1-210ENST00000483060 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
SGIP1-210ENST00000483060 AKT1S1Q96B36 256 aa17.76■□□□□ 0.43
SGIP1-210ENST00000483060 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
SGIP1-210ENST00000483060 REM2Q8IYK8 340 aaPredicted RBP17.55■□□□□ 0.4
SGIP1-210ENST00000483060 ZBTB22O15209 634 aa17.52■□□□□ 0.4
SGIP1-210ENST00000483060 ATXN8OSP0DMR3 200 aa17.5■□□□□ 0.39
SGIP1-210ENST00000483060 PIP4P2Q8N4L2 257 aa17.41■□□□□ 0.38
SGIP1-210ENST00000483060 SP7Q8TDD2 431 aaPredicted RBP17.38■□□□□ 0.37
SGIP1-210ENST00000483060 PITPNM1O00562 1244 aa17.35■□□□□ 0.37
SGIP1-210ENST00000483060 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
SGIP1-210ENST00000483060 FBLN2P98095 1184 aa17.28■□□□□ 0.36
SGIP1-210ENST00000483060 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
SGIP1-210ENST00000483060 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
SGIP1-210ENST00000483060 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
SGIP1-210ENST00000483060 HAX1O00165 279 aa17.19■□□□□ 0.34
SGIP1-210ENST00000483060 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
SGIP1-210ENST00000483060 SPDYE1Q8NFV5 336 aaPredicted RBP17.02■□□□□ 0.32
SGIP1-210ENST00000483060 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
SGIP1-210ENST00000483060 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
SGIP1-210ENST00000483060 SSUH2Q9Y2M2 353 aa16.95■□□□□ 0.3
SGIP1-210ENST00000483060 PRKAR2AP13861 404 aaKnown RBP16.92■□□□□ 0.3
SGIP1-210ENST00000483060 EVX2Q03828 476 aa16.88■□□□□ 0.29
SGIP1-210ENST00000483060 C19orf67A6NJJ6 358 aa16.74■□□□□ 0.27
SGIP1-210ENST00000483060 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
SGIP1-210ENST00000483060 PRR29P0C7W0 189 aa16.67■□□□□ 0.26
SGIP1-210ENST00000483060 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
SGIP1-210ENST00000483060 GABBR2O75899 941 aa16.55■□□□□ 0.24
SGIP1-210ENST00000483060 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
SGIP1-210ENST00000483060 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
SGIP1-210ENST00000483060 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
SGIP1-210ENST00000483060 CLCN6P51797 869 aa16.32■□□□□ 0.2
SGIP1-210ENST00000483060 LHX8Q68G74 356 aa16.3■□□□□ 0.2
SGIP1-210ENST00000483060 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
SGIP1-210ENST00000483060 POTEIP0CG38 1075 aa16.15■□□□□ 0.18
SGIP1-210ENST00000483060 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
SGIP1-210ENST00000483060 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
SGIP1-210ENST00000483060 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
SGIP1-210ENST00000483060 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
SGIP1-210ENST00000483060 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
SGIP1-210ENST00000483060 DCBLD2Q96PD2 775 aa16.09■□□□□ 0.17
SGIP1-210ENST00000483060 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
SGIP1-210ENST00000483060 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
SGIP1-210ENST00000483060 GALR2O43603 387 aaPredicted RBP15.9■□□□□ 0.14
SGIP1-210ENST00000483060 MNX1P50219 401 aaPredicted RBP15.83■□□□□ 0.12
SGIP1-210ENST00000483060 PHF12Q96QT6 1004 aa15.81■□□□□ 0.12
SGIP1-210ENST00000483060 PROM2Q8N271 834 aa15.69■□□□□ 0.1
SGIP1-210ENST00000483060 OTUD5Q96G74 571 aa15.63■□□□□ 0.09
SGIP1-210ENST00000483060 MS4A3Q96HJ5 214 aa15.61■□□□□ 0.09
SGIP1-210ENST00000483060 POTEB2H3BUK9 544 aa15.6■□□□□ 0.09
SGIP1-210ENST00000483060 ASTLQ6HA08 431 aaPredicted RBP15.59■□□□□ 0.09
SGIP1-210ENST00000483060 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
SGIP1-210ENST00000483060 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
SGIP1-210ENST00000483060 SLC39A7Q92504 469 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms